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Job DescriptionP77279
Confidence100.00%DateThu Jan 5 12:27:10 GMT 2012
Rank55Aligned Residues192
% Identity25%Templatec2iw3B_
PDB info PDB header:translationChain: B: PDB Molecule:elongation factor 3a; PDBTitle: elongation factor 3 in complex with adp
Resolution2.4 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50.........60.........70.........80.......
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Query Sequence  LQLQNVGYLAGDAKILNNINFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEIYRQQVSYCA
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Template Sequence  LCNCEFSLAYGAKILLNKTQLRLKRARRYGICGPNGCGKSTLXRAIANGQVDGFPTQ. . . . . . . . . . . . . . EECRTVYVE
Template Known Secondary structure  TTTT

STTSSTT
STT


T..............TTS
TT
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   430.........440.........450.........460.........470.........480...... ...490.....
 
   88.90 .........100.........110.........120.........130.........140.........150.........160.....
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Query Sequence  QTP. . TLFGDTVYDNLIFPWQIRNRQPDPAIFLDFLERFALPDSILTKNIAELSGGEKQRISLIRNLQFMPKVLLLDEIT
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Template Sequence  HDIDGTHSDTSVLDFVF. . . . . ESGVGTKEAIKDKLIEFGFTDEXIAXPISALSGGWKXKLALARAVLRNADILLLDEPT
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TTSB.....TT

S
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SBGGG

TT
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   496...500.........510.. .......520.........530.........540.........550.........560.........570
 
   166...170.........180.........190.........200.. .......210.........220..
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Query Sequence  SALDESNKHNVNEMIHRYVREQNIAVLWVTHDKDEIN. HADKVITLQPHAGEMQEARY
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Template Sequence  NHLDTVNVAWLVNYLNTC. . . . GITSITISHDSVFLDNVCEYIINYEGLKLRKYKGNF
Template Known Secondary structure  TT

S....
S
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   571........580........ .590.........600.........610.........620....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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