Job Description P77279 Confidence 100.00% Date Thu Jan 5 12:27:10 GMT 2012 Rank 55 Aligned Residues 192 % Identity 25% Template c2iw3B_ PDB info PDB header:translation Chain: B: PDB Molecule:elongation factor 3a; PDBTitle: elongation factor 3 in complex with adp Resolution 2.4 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	L	Q	N	V	G	Y	L	A	G	D	A	K	I	L	N	N	I	N	F	S	L	R	A	G	E	F	K	L	I	T	G	P	S	G	C	G	K	S	T	L	L	K	I	V	A	S	L	I	S	P	T	S	G	T	L	L	F	E	G	E	D	V	S	T	L	K	P	E	I	Y	R	Q	Q	V	S	Y	C	A
Query Conservation
Alig confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	C	N	C	E	F	S	L	A	Y	G	A	K	I	L	L	N	K	T	Q	L	R	L	K	R	A	R	R	Y	G	I	C	G	P	N	G	C	G	K	S	T	L	X	R	A	I	A	N	G	Q	V	D	G	F	P	T	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	C	R	T	V	Y	V	E
Template Known Secondary structure												T	T													T	T								S	T	T	S	S										T	T		S	T	T				T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S					T	T
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.															.	.	.	490	.	.	.	.	.
		88	.	90			.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		Q	T	P	.	.	T	L	F	G	D	T	V	Y	D	N	L	I	F	P	W	Q	I	R	N	R	Q	P	D	P	A	I	F	L	D	F	L	E	R	F	A	L	P	D	S	I	L	T	K	N	I	A	E	L	S	G	G	E	K	Q	R	I	S	L	I	R	N	L	Q	F	M	P	K	V	L	L	L	D	E	I	T
Query Conservation					.	.
Alig confidence					.	.													.	.	.	.	.
Template Conservation																			.	.	.	.	.
Template Sequence		H	D	I	D	G	T	H	S	D	T	S	V	L	D	F	V	F	.	.	.	.	.	E	S	G	V	G	T	K	E	A	I	K	D	K	L	I	E	F	G	F	T	D	E	X	I	A	X	P	I	S	A	L	S	G	G	W	K	X	K	L	A	L	A	R	A	V	L	R	N	A	D	I	L	L	L	D	E	P	T
Template Known Secondary structure									T	T	S	B							.	.	.	.	.	T	T			S													T								S	B	G	G	G																	T	T		S						S	T	T
Template Predicted Secondary structure																			.	.	.	.	.
Template SS confidence
		496	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.						.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		S	A	L	D	E	S	N	K	H	N	V	N	E	M	I	H	R	Y	V	R	E	Q	N	I	A	V	L	W	V	T	H	D	K	D	E	I	N	.	H	A	D	K	V	I	T	L	Q	P	H	A	G	E	M	Q	E	A	R	Y
Query Conservation																																							.
Alig confidence																				.	.	.	.																.
Template Conservation																				.	.	.	.
Template Sequence		N	H	L	D	T	V	N	V	A	W	L	V	N	Y	L	N	T	C	.	.	.	.	G	I	T	S	I	T	I	S	H	D	S	V	F	L	D	N	V	C	E	Y	I	I	N	Y	E	G	L	K	L	R	K	Y	K	G	N	F
Template Known Secondary structure		T	T																S	.	.	.	.		S							S										S							T	T							S
Template Predicted Secondary structure																				.	.	.	.
Template SS confidence
		571	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.					.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions