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Job DescriptionP77279
Confidence100.00%DateThu Jan 5 12:27:10 GMT 2012
Rank12Aligned Residues214
% Identity32%Templatec1z47B_
PDB info PDB header:ligand binding proteinChain: B: PDB Molecule:putative abc-transporter atp-binding protein; PDBTitle: structure of the atpase subunit cysa of the putative2 sulfate atp-binding cassette (abc) transporter from3 alicyclobacillus acidocaldarius
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10....... ..20.........30.........40.........50.........60.........70.........80......
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Query Sequence  LQLQNVGYLA. GDAKILNNINFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEIYRQQVSYC
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Template Sequence  IEFVGVEKIYPGGARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGGKRVTDLPPQ. . KRNVGLV
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TTSTT

TT

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STT
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GG..GSS
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   15....20.........30.........40.........50.........60.........70.........80..... ....90..
 
   87..90..... ....100......... 110.........120.........130.........140.........150.........160...
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Query Sequence  AQTPTLFGD. TVYDNLIFPWQIRN. . RQPDPAIFLDFLERFALPDSILTKNIAELSGGEKQRISLIRNLQFMPKVLLLDE
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Template Sequence  FQNYALFQHMTVYDNVSFGLREKRVPKDEMDARVRELLRFMRL. ESYANRFPHELSGGQQQRVALARALAPRPQVLLFDE
Template Known Secondary structure  TT



TTS
TTGGGTT

TT
.GGGTTS
GGGS
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   93......100.........110.........120.........130..... ....140.........150.........160.........170.
 
   164.....170.........180.........190.........200.. .......210.........220....
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Query Sequence  ITSALDESNKHNVNEMIHRYVREQNIAVLWVTHDKDEIN. HADKVITLQPHAGEMQEARYEL
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Template Sequence  PFAAIDTQIRRELRTFVRQVHDEMGVTSVFVTHDQEEALEVADRVLVLHEGNVEQFGTPEEV
Template Known Secondary structure  TTTTS


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   172.......180.........190.........200.........210.........220.........230...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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