Job Description P77279 Confidence 97.60% Date Thu Jan 5 12:27:10 GMT 2012 Rank 133 Aligned Residues 149 % Identity 14% Template c1t4gA_ PDB info PDB header:recombination Chain: A: PDB Molecule:dna repair and recombination protein rada; PDBTitle: atpase in complex with amp-pnp Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	A	G	E	F	K	L	I	T	G	P	S	G	C	G	K	S	T	L	L	K	I	V	A	S	L	I	S	P	T	S	G	T	L	L	F	E	G	E	D	V	S	T	L	K	P	E	I	Y	R	Q	Q	V	S	Y	C	A	Q	T	P	T	L	F	G	D	T	V	Y	D	N	L	I	F	P	W	Q	I	R	N
Query Conservation
Alig confidence																																								.	.	.																																						.	.
Template Conservation																																								.	.	.																																						.	.
Template Sequence		L	E	S	Q	S	V	T	E	F	A	G	V	F	G	S	G	K	T	Q	I	M	H	Q	S	C	V	N	L	Q	N	P	E	F	L	F	Y	D	E	.	.	.	E	A	V	S	K	G	E	V	A	Q	P	K	A	V	Y	I	D	T	E	G	T	F	R	P	E	R	I	M	Q	M	A	E	H	A	G	I	D	.	.
Template Known Secondary structure				B	T	S							S	T	T	S	S												T	T		G	G	G					T	.	.	.	T	T	S		G	G	G	G	S	S								S	S	S															T	S		.	.
Template Predicted Secondary structure																																								.	.	.																																						.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.				.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.			.	.	.	160	.	.									.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																																																	.	.							.	.	.	.	.	.	.	.														.	.	.	.
Query SS confidence																																																	.	.							.	.	.	.	.	.	.	.														.	.	.	.
Query Sequence		R	Q	P	D	P	A	I	F	L	D	F	L	E	R	F	A	L	P	D	S	I	L	T	K	N	I	A	E	L	S	G	G	E	K	Q	R	I	S	L	I	R	N	L	Q	F	M	P	.	.	K	V	L	L	L	D	.	.	.	.	.	.	.	.	E	I	T	S	A	L	D	E	S	N	K	H	N	.	.	.	.
Query Conservation																																																	.	.							.	.	.	.	.	.	.	.														.	.	.	.
Alig confidence		.	.	.	.	.	.	.												.	.	.	.	.	.																								.	.							.	.	.	.	.	.	.	.														.	.	.	.
Template Conservation		.	.	.	.	.	.	.												.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	G	Q	T	V	L	D	N	T	F	V	A	.	.	.	.	.	.	R	A	Y	N	S	D	M	Q	M	L	F	A	E	K	I	E	D	L	I	Q	E	G	N	N	I	K	L	V	V	I	D	S	L	T	S	T	F	R	N	E	Y	T	G	R	G	K	L	A	E	R	Q	Q	K	L	G	R
Template Known Secondary structure		.	.	.	.	.	.	.							T					.	.	.	.	.	.			S	S										T							T	T											S	S							S		S	T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.												.	.	.	.	.	.
Template SS confidence
									170	.	.	.	.	.	.	.	.	.	180							.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	E	M	I	H	R	Y	V	R	E	Q	N	I	A	V	L	W	V	T	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	M	A	T	L	N	K	L	A	D	L	F	N	C	V	V	L	V	T	N	Q
Template Known Secondary structure													T	T
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions