Return to main results Retrieve Phyre Job Id

Job DescriptionP33570
Confidence100.00%DateThu Jan 5 11:52:13 GMT 2012
Rank19Aligned Residues301
% Identity27%Templated2ieaa2
SCOP infoThiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) TK-like PP module
Resolution1.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  RKDLANAIRALSMDAVQKAN. . . . . . SGHPGAPMGMADIAEVLWNDFLKHNPTDPTWYDRDRFILSNGHASMLLYSLLHL
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Template Sequence  ERRIRSAIRWNAIMTVLRASKKDLELGGHMASFQSSATIYDVCFNHFFR. . . . ARNEQDGGDLVYFQGHISPGVYARAFL
Template Known Secondary structure  T
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   78.80.........90.........100.........110.........120...... ...130.........140.........150...
 
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Query Sequence  TGYDLPLEELKNFRQLHSK. . TPGHPEIGYTPG. VETTTGPLGQGLANAVGLAIAERTLAAQFNQPDHEIVDHFTYVFMG
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Template Sequence  EGR. LTQEQLDNFRQEVHGNGLSSYPHPKLMPEFWQFPTVSMGLGPIGAIYQAKFLKYLEHRGLK. . . DTSKQTVYAFLG
Template Known Secondary structure  TTS.S
TTBT

TTSS
B
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TTTSTTT





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TT

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   154.. ...160.........170.........180.........190.........200.........210....... ..220.........
 
   154.....160.........170.........180.........190....... ..200.........210....
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Query Sequence  DGCLMEGISHEVCSLAGTLGLGKLIGFYDHNGISIDGETEGWFT. . DDTAKRFEAYHWHVIHE. . . . . . . . . . . . . . . . .
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Template Sequence  DGEMDEPESKGAITIATREKLDNLVFVINCNLQRLDGPVTGNGKIINELEGIFEGAGWNVIKVMWGSRWDELLRKDTSGK
Template Known Secondary structure  TGGGGSTTTT
TT
SB
SSSBS
TTS
TT

B
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   230.........240.........250.........260.........270.........280.........290.........300.........
 
   215....220.........230.........240...
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . IDGHDPQAVKEAILEAQSVKDKPSLIICR
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Template Sequence  LIQLMNETVDGDYQTFKSKDGAYVREHFFGKYPETAALVADWTDEQIWALNRGGHDPKKIYAAFKKAQETKGKATVILAH
Template Known Secondary structure 

TTS
TGGGSTTSTTS
TT

BGGG


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   310.........320.........330.........340.........350.........360.........370.........380.........
 
   244.....250.........260.........270.........280.........290.........300.........310.........320...
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Query Sequence  TVIGFGSPNKAGKEEAHGAPLGEEEVALARQKLGWHHPPFEIPKEIYHAWDAREKGEKAQQSWNEKFAAYKKAHPQLAEE
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Template Sequence  TIKGYGMGDA. . . . . . . . . . . AMDGVRHIRDRFNVPVSDADIEK. . . LPYITFPEGSEEHTYLHAQRQKLHGYLPSRQPN
Template Known Secondary structure 

TTTT
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TTSTTTS
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   390......... 400.........410.........420.. .......430.........440.........450.....
 
   324.
Predicted Secondary structure 
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Query Sequence  FT
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Template Sequence  FT
Template Known Secondary structure 

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   469470
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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