Return to main results Retrieve Phyre Job Id

Job DescriptionP33570
Confidence100.00%DateThu Jan 5 11:52:13 GMT 2012
Rank39Aligned Residues292
% Identity17%Templated1w85a_
SCOP infoThiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Branched-chain alpha-keto acid dehydrogenase PP module
Resolution2.0

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
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Query Sequence  LANAIRALSMDAVQKANSGHPGAPMGMADIAEVLWNDFLKHNPTDPTWYDRDRFILSNGHASMLLYSLLHLTGYDLPLEE
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Template Sequence  YTRILDQRSISLNRQGRLGFYAPTAGQEASQIASHFAL. . . . . E. KE. . . . DFIL. . PGYRD. . . VPQIIWHGL. PLYQA
Template Known Secondary structure  TTS

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   55....60.........70.........80.........90.. . .. .... 100.... .....110... .....
 
   86...90.........100.........110.........120.........130.........140.........150.........160.....
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Query Sequence  LKNFRQLHSKTPGHPEIGYTPGVETTTGPLGQGLANAVGLAIAERTLAAQFNQPDHEIVDHFTYVFMGDGCLMEGISHEV
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Template Sequence  FLFSRGHF. . . . HGNQIPEGVNVLPPQIIIGAQYIQAAGVALGLKMRGK. . . . . . . . . . KAVAITYTGDGGTSQGDFYEG
Template Known Secondary structure  T
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TT

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STTTT
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TGGGGS
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   119120...... ...130.........140.........150.........160... ......170.........180....
 
   166...170.........180.........190....... ..200.........210.........220.........230... ......240.
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Query Sequence  CSLAGTLGLGKLIGFYDHNGISIDGETEGWFT. DDTAKRFEAYHWHVIHEIDGHDPQAVKEAILEAQSV. . . KDKPSLII
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Template Sequence  INFAGAFKAP. AIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQ. VDGMDPLAVYAAVKAARERAINGEGPTLIE
Template Known Secondary structure  TT

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STTGGGT
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   185....190.... .....200.........210.........220.........230.. .......240.........250.........260..
 
   242.......250.........260.........270.........280.........290.........300.........310.........320.
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Query Sequence  CRTVIGFGSPNKAGKEEAHGAPLGEEEVALARQKLGWHHPPFEIPKEIYHAWDAREKGEKAQQSWNEKFAAYKKAHPQLA
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Template Sequence  TLCFRYGPHTMSGDSKELENEWAKKDPLVRFRKFL. . . . . . . . EAKGLWSEEEENNVIEQAKEEIKEAIKKADETPKQKV
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   263......270.........280.........290....... ..300.........310.........320.........330....
 
   322.......330.......
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Query Sequence  EEFTRRMSGGLPKDWE
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Template Sequence  TDLISIMFEELPFNLK
Template Known Secondary structure  TS
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   341........350......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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