 |
Job Description | P33570 | Confidence | 99.91% | Date | Thu Jan 5 11:52:13 GMT 2012 |
Rank | 47 | Aligned Residues | 131 |
% Identity | 38% | Template | d1r9ja3 |
SCOP info | TK C-terminal domain-like
| TK C-terminal domain-like
| Transketolase C-terminal domain-like
|
Resolution | 2.22 |
|
 |
  |   |
530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | Q | V | K | E | I | A | R | G | G | Y | V | L | K | D | S | G | G | K | P | D | I | I | L | I | A | T | G | S | E | M | E | I | T | L | Q | A | A | E | K | L | A | G | E | G | R | N | V | R | V | V | S | L | P | S | T | D | I | F | D | A | Q | D | E | E | Y | R | E | S | V | L | P | S | N | V | A | A | R | V | A |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|   |
|   |   |
|   |   |
|
|   |
|
|   |   |
|   |   |   |
|
|   |   |   |
|
|   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|
|
|
|   |
|   |   | . |   |
|
|   |
|
|   |
|
|
|   |
|
|   |
|   |   |
|
|   |
|
|   |   |
|   |   | . |
|
|   |
|   |
|
|   |   |   |   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |
|
|
|
Template Sequence |   |
S | S | I | E | G | V | R | H | G | A | Y | S | V | V | D | . |
V | P | D | L | Q | L | V | I | V | A | S | G | S | E | V | S | L | A | V | D | A | A | K | A | L | S | G | . |
E | L | R | V | R | V | V | S | M | P | C | Q | E | L | F | D | A | Q | P | D | T | Y | R | Q | A | V | L | P | A | G | V | P | . |
V | V | S |
Template Known Secondary structure |   |
|
|  |  |  |  |  | T | S |
|  |  |  |  |
| . |
| T | T |
| S |  |  |  |  |  |
| G | G | G |  |  |  |  |  |  |  |  |  |  |  | T | T | . | T |
|
|  |  |  |  |  |
| S |
|  |  |  |  |  | T | S |
|  |  |  |  |  |  |  | S |
| T | T | S |
| . |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  | . |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  | . |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
527 | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | |
. | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | |
. | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | |
. | . | . |
  |
  |   |
610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | E | A | G | I | A | D | Y | W | Y | K | Y | V | G | L | K | G | A | I | V | G | M | T | G | Y | G | E | S | A | P | A | D | K | L | F | P | F | F | G | F | T | A | E | N | I | V | A | K | A | H | K | V | L | G | V | K | G |
Query Conservation |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |   |
|
|
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |   |   |
|   |   |   |   |   | . | . | . |   |   |   |
|
|   |
|   |
|   |   |
|
|   |   |   |   |
|   |   |   |   |
|
|   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|   |   |
Template Sequence |   |
V | E | A | Y | V | S | F | G | W | E | K | Y | S | . |
. |
. |
H | A | H | V | G | M | S | G | F | G | A | S | A | P | A | G | V | L | Y | K | K | F | G | I | T | V | E | E | V | V | R | T | G | R | E | L | A | K | R | F | P |
Template Known Secondary structure |   |
 |
| S | S |
|
| T | T | G | G | G | T |
| . | . | . | S |  |  |  | S |
| S | S |
|
|
| S | S |
|  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|  |  |  |  | . | . | . |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
604 | . | . | . | . | . | 610 | . | . | . | . | . | . | |
|
|
. | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|