Job Description P33570 Confidence 100.00% Date Thu Jan 5 11:52:13 GMT 2012 Rank 37 Aligned Residues 186 % Identity 11% Template d1qs0b1 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Branched-chain alpha-keto acid dehydrogenase Pyr module Resolution 2.40

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		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	K	I	A	T	R	K	A	S	Q	N	T	L	N	A	Y	G	P	M	L	P	E	L	L	G	G	S	A	D	L	A	P	S	N	L	T	I	W	K	G	S	V	S	L	K	E	D	P	A	G	N	Y	I	H	Y	G	V	R	E	F	G	M	T	A	I	A	N	G	I	A	H	H	G	G	F	V	P	Y	T
Query Conservation
Alig confidence																																																																												.
Template Conservation																																																																												.
Template Sequence		T	T	T	X	T	X	I	Q	A	L	R	S	A	X	D	V	X	L	E	R	D	D	N	V	V	V	Y	G	Q	D	V	G	Y	F	G	G	V	F	R	C	T	E	G	L	Q	T	K	Y	G	K	S	R	V	F	D	A	P	I	S	E	S	G	I	V	G	T	A	V	G	X	G	A	Y	G	.	L	R	P	V	V
Template Known Secondary structure																							T	T						T	T		S	S	S			T	T	S	T	T	T	T							T	T	T						S																T	.
Template Predicted Secondary structure																																																																												.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.
		431	.		.	.	.	.	.	.	.	440	.	.	.	.	.	.	.		.	.	450							.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.
Predicted Secondary structure				.																.				.	.	.	.	.	.
Query SS confidence				.																.				.	.	.	.	.	.
Query Sequence		A	T	.	F	L	M	F	V	E	Y	A	R	N	A	A	R	M	A	.	A	L	M	.	.	.	.	.	.	K	A	R	Q	I	M	V	Y	T	H	D	S	I	G	L	G	E	D	G	P	T	H	Q	A	V	E	Q	L	A	S	L	R	L	T	P	N	F	S	T	W	R	P	C	D	Q	V	E	A	A	V	G	W
Query Conservation				.																.				.	.	.	.	.	.
Alig confidence				.																.				.	.	.	.	.	.													.
Template Conservation																																										.
Template Sequence		E	I	Q	F	A	D	Y	F	Y	P	A	S	D	Q	I	V	S	E	X	A	R	L	R	Y	R	S	A	G	E	F	I	A	P	L	T	L	R	X	P	C	.	G	G	G	I	Y	G	G	Q	T	H	S	Q	S	P	E	A	X	F	T	Q	V	C	G	L	R	T	V	X	P	S	N	P	Y	D	A	K	G	L	L
Template Known Secondary structure				S		G	G	G		G	G	G						T	T	T	T	T					T	T	T	S	S											.			S	S	S			S	S	S	S								T	T	S	T	T								S
Template Predicted Secondary structure																																										.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		503	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	A	V	E	R	H	N	G	P	T	A	L	I	L	S	R	Q	N	L	A	Q	V	E	R	T	P	D	Q	V	K	E	I	A	R	G	G
Query Conservation
Alig confidence										.
Template Conservation										.
Template Sequence		I	A	S	I	E	C	D	D	.	P	V	I	F	L	E	P	K	R	L	Y	N	G	P	F	D	G	H	H	D	R	P	V	T	P	W	S	K
Template Known Secondary structure							S	S	S	.								G	G	G	S	S	S				S		S	S	S					S	T	T
Template Predicted Secondary structure										.
Template SS confidence
		161	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions