Job Description P33570 Confidence 100.00% Date Thu Jan 5 11:52:13 GMT 2012 Rank 27 Aligned Residues 190 % Identity 49% Template d1gpua2 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) TK-like Pyr module Resolution 1.86

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		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.							.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.
Query Sequence		L	P	K	D	W	E	K	T	T	Q	K	Y	I	N	E	L	Q	A	N	P	A	K	I	A	T	R	K	A	S	Q	N	T	L	N	A	Y	G	P	M	L	P	E	L	L	G	G	S	A	D	L	A	P	S	N	L	T	I	W	K	G	.	.	.	.	.	.	S	V	S	L	K	E	D	P	A	G	N	Y	I	H
Query Conservation																																																														.	.	.	.	.	.
Alig confidence															.	.	.	.																																												.	.	.	.	.	.
Template Conservation															.	.	.	.
Template Sequence		L	P	A	N	W	E	S	K	L	P	T	Y	T	.	.	.	.	A	K	D	S	A	V	A	T	R	K	L	S	E	T	V	L	E	D	V	Y	N	Q	L	P	E	L	I	G	G	S	A	D	L	T	P	S	N	L	T	R	W	K	E	A	L	D	F	Q	P	P	S	S	G	S	G	N	Y	S	G	R	Y	I	R
Template Known Secondary structure				T	T	G	G	G	G	S					.	.	.	.	T	T	S			B														T	T	T		T	T						S	S						T		S		T	T							T	T	T	S	S			T	T
Template Predicted Secondary structure															.	.	.	.
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350					.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.		.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		Y	G	V	R	E	F	G	M	T	A	I	A	N	G	I	A	H	H	G	G	.	F	V	P	Y	T	A	T	F	L	M	F	V	E	Y	A	R	N	A	A	R	M	A	A	L	M	K	A	R	Q	I	M	V	Y	T	H	D	S	I	G	L	G	E	D	G	P	T	H	Q	A	V	E	Q	L	A	S	L	R	L	T
Query Conservation																						.
Alig confidence																						.
Template Conservation
Template Sequence		Y	G	I	R	E	H	A	M	G	A	I	M	N	G	I	S	A	F	G	A	N	Y	K	P	Y	G	G	T	F	L	N	F	V	S	Y	A	A	G	A	V	R	L	S	A	L	S	G	H	P	V	I	W	V	A	T	H	D	S	I	G	V	G	E	D	G	P	T	H	Q	P	I	E	T	L	A	H	F	R	S	L
Template Known Secondary structure				S																	T	T													G	G	G											T											S	G	G	G		T	T		T	T	T			S	S							T	S
Template Predicted Secondary structure
Template SS confidence
		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.
		485	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	N	F	S	T	W	R	P	C	D	Q	V	E	A	A	V	G	W	K	L	A	V	E	R	H	N	G	P	T	A	L	I	L	S	R	Q	N	L	A	Q	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	N	I	Q	V	W	R	P	A	D	G	N	E	V	S	A	A	Y	K	N	S	L	E	S	K	H	T	P	S	I	I	A	L	S	R	Q	N	L	P	Q	L
Template Known Secondary structure		S	S								S															S	S									S	S		B
Template Predicted Secondary structure
Template SS confidence
		494	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions