Job Description P33570 Confidence 100.00% Date Thu Jan 5 11:52:13 GMT 2012 Rank 9 Aligned Residues 624 % Identity 43% Template c3m7iA_ PDB info PDB header:transferase Chain: A: PDB Molecule:transketolase; PDBTitle: crystal structure of transketolase in complex with thiamine2 diphosphate, ribose-5-phosphate(pyranose form) and3 magnesium ion Resolution 1.75 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	D	L	A	N	A	I	R	A	L	S	M	D	A	V	Q	K	A	N	S	G	H	P	G	A	P	M	G	M	A	D	I	A	E	V	L	W	N	D	F	L	K	H	N	P	T	D	P	T	W	Y	D	R	D	R	F	I	L	S	N	G	H	A	S	M	L	L	Y	S	L	L	H	L	T	G	Y	D	L	P
Query Conservation
Alig confidence																																									.
Template Conservation																																									.
Template Sequence		L	Q	E	Q	A	N	T	L	R	F	L	S	A	D	X	V	Q	K	A	N	S	G	H	P	G	A	P	L	G	L	A	D	I	L	S	V	L	S	Y	.	H	L	K	H	N	P	K	N	P	T	W	L	N	R	D	R	L	V	F	S	G	G	H	A	S	A	L	L	Y	S	F	L	H	L	S	G	Y	D	L	S
Template Known Secondary structure																					T		S																		.						T	T		T	T		T	T	S						S	S	G	G	G												T		S
Template Predicted Secondary structure																																									.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	E	L	K	N	F	R	Q	L	H	S	K	T	P	G	H	P	E	I	G	Y	T	P	G	V	E	T	T	T	G	P	L	G	Q	G	L	A	N	A	V	G	L	A	I	A	E	R	T	L	A	A	Q	F	N	Q	P	D	H	E	I	V	D	H	F	T	Y	V	F	M	G	D	G	C	L	M	E	G	I	S
Query Conservation
Alig confidence																						.																																	.	.	.
Template Conservation																						.																																	.	.	.
Template Sequence		L	E	D	L	K	N	F	R	Q	L	H	S	K	T	P	G	H	P	E	I	.	S	T	L	G	V	E	I	A	T	G	P	L	G	Q	G	V	A	N	A	V	G	F	A	X	A	A	K	K	A	Q	N	L	.	.	.	L	G	S	D	L	I	D	H	K	I	Y	C	L	C	G	D	G	D	L	Q	E	G	I	S
Template Known Secondary structure							T	T	T		T	T		S	S		S	S			T	.	T	S	T	T			S				S	T	T																				.	.	.			T	T	T																S
Template Predicted Secondary structure																						.																																	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	E	V	C	S	L	A	G	T	L	G	L	G	K	L	I	G	F	Y	D	H	N	G	I	S	I	D	G	E	T	E	G	W	F	T	D	D	T	A	K	R	F	E	A	Y	H	W	H	V	I	H	E	I	D	G	H	D	P	Q	A	V	K	E	A	I	L	E	A	Q	S	V	K	D	K	P	S	L	I	I	C
Query Conservation
Alig confidence																																																					.																			.
Template Conservation																																																					.																			.
Template Sequence		Y	E	A	C	S	L	A	G	L	H	K	L	D	N	F	I	L	I	Y	D	S	N	N	I	S	I	E	G	D	V	G	L	A	F	N	E	N	V	K	X	R	F	E	A	Q	G	F	E	V	L	S	.	I	N	G	H	D	Y	E	E	I	N	K	A	L	E	Q	A	K	K	.	S	T	K	P	C	L	I	I	A
Template Known Secondary structure											T	T		T	T									S			T	T			G	G	G	T												T	T						.			T	T														T	.		S	S
Template Predicted Secondary structure																																																					.																			.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.			.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure																																																			.	.
Query SS confidence																																																			.	.
Query Sequence		R	T	V	I	G	F	G	S	P	N	K	A	G	K	E	E	A	H	G	A	P	L	G	E	E	E	V	A	L	A	R	Q	K	L	G	W	H	H	P	P	F	E	I	P	K	E	I	Y	H	.	.	A	W	D	A	R	E	K	G	E	K	A	Q	Q	S	W	N	E	K	F	A	A	Y	K	K	A	H	P	Q	L
Query Conservation																																																			.	.
Alig confidence																																																			.	.
Template Conservation
Template Sequence		K	T	T	I	A	K	G	A	G	E	L	E	G	S	H	K	S	H	G	A	P	L	G	E	E	V	I	K	K	A	K	E	Q	A	G	F	D	P	N	I	S	F	H	I	P	Q	A	S	K	I	R	F	E	S	A	V	E	L	G	D	L	E	E	A	K	W	K	D	K	L	E	K	S	A	K	K	E	L	L	E
Template Known Secondary structure					T	T	T	T		G	G	G	T	T		G	G	G	S	S	S															T			T	T			S																																T	T
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	E	F	T	R	R	M	S	G	G	L	P	K	D	W	E	K	T	T	Q	K	Y	I	N	E	L	Q	A	N	P	A	K	I	A	T	R	K	A	S	Q	N	T	L	N	A	Y	G	P	M	L	P	E	L	L	G	G	S	A	D	L	A	P	S	N	L	T	I	W	K	G	S	V	S	L	K	E	D	P	A
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.
Template Sequence		R	L	L	N	P	D	F	N	K	I	A	Y	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	K	G	K	D	L	A	T	R	D	S	N	G	E	I	L	N	V	L	A	K	N	L	E	G	F	L	G	G	S	A	D	L	G	P	S	N	K	T	.	.	.	E	L	H	S	X	G	D	F	V	E
Template Known Secondary structure					S				T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T			B																		T	T						S	S						T		.	.	.			T	T	S		B	T	T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.															.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.				.	.	.	.	.	.	.	.	380	.
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	Y	I	H	Y	G	V	R	E	F	G	M	T	A	I	A	N	G	I	A	H	H	G	G	F	V	P	Y	T	A	T	F	L	M	F	V	E	Y	A	R	N	A	A	R	M	A	A	L	M	K	A	R	Q	I	M	V	Y	T	H	D	S	I	G	L	G	E	D	G	P	T	H	Q	A	V	E	Q	L	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	K	N	I	H	F	G	I	R	E	H	A	X	A	A	I	N	N	A	F	A	R	Y	G	I	F	L	P	F	S	A	T	F	F	I	F	S	E	Y	L	K	P	A	A	R	I	A	A	L	X	K	I	K	H	F	F	I	F	T	H	D	S	I	G	V	G	E	D	G	P	T	H	Q	P	I	E	Q	L	S	T
Template Known Secondary structure		S	S						S																S	S									G	G	G	G	G	G	T											T											S	G	G	G		T	T		G	G	G	S		S	S
Template Predicted Secondary structure
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	L	T	P	N	F	S	T	W	R	P	C	D	Q	V	E	A	A	V	G	W	K	L	A	V	E	R	H	N	G	P	T	A	L	I	L	S	R	Q	N	L	A	Q	V	E	R	T	P	D	Q	V	K	E	I	A	R	G	G	Y	V	L	K	D	S	G	G	K	P	D	I	I	L	I	A	T	G	S	E	M
Query Conservation
Alig confidence																												.																									.	.												.
Template Conservation																												.																									.	.												.
Template Sequence		F	R	A	X	P	N	F	L	T	F	R	P	A	D	G	V	E	N	V	K	A	W	Q	I	A	L	.	N	A	D	I	P	S	A	F	V	L	S	R	Q	K	L	K	A	L	N	E	P	V	F	G	.	.	D	V	K	N	G	A	Y	L	L	K	E	.	S	K	E	A	K	F	T	L	L	A	S	G	S	E	V
Template Known Secondary structure					S	S	S							S	S													.		S	S	S								S	S		B							S	B		.	.		G	G	G	S	S						.		T	T		S							G	G	G
Template Predicted Secondary structure																												.																									.	.												.
Template SS confidence
		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.		.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.			.	.	.	.	.	.	.	.	520	.	.		.	.	.	.	.	.	.	530	.	.	.	.	.	.	.
		561	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	T	L	Q	A	A	E	K	L	A	G	E	G	R	N	V	R	V	V	S	L	P	S	T	D	I	F	D	A	Q	D	E	E	Y	R	E	S	V	L	P	S	N	V	A	A	R	V	A	V	E	A	G	I	A	D	Y	W	Y	K	Y	V	G	L	K	G	A	I	V	G	M	T	G	Y	G	E	S	A	P	A
Query Conservation
Alig confidence																																											.	.	.																.	.	.
Template Conservation																																											.	.	.																.	.	.
Template Sequence		W	L	C	L	E	S	A	N	E	L	E	K	Q	G	F	A	C	N	V	V	S	X	P	C	F	E	L	F	E	K	Q	D	K	A	Y	Q	E	R	L	L	K	.	.	.	G	E	V	I	G	V	E	A	A	H	S	N	E	L	Y	.	.	.	K	F	C	H	K	V	Y	G	I	E	S	F	G	E	S	G	K	D
Template Known Secondary structure														T	T									S	B						T	S									S		.	.	.	S							S	S			G	G	G	G	.	.	.	G	T		S							S				S	S
Template Predicted Secondary structure																																											.	.	.																.	.	.
Template SS confidence
		538	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.				.	580	.	.	.	.	.	.	.	.	.	590	.	.	.				.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.
		641	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	L	F	P	F	F	G	F	T	A	E	N	I	V	A	K	A	H	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	D	V	F	E	R	F	G	F	S	V	S	K	L	V	N	F	I	L	S
Template Known Secondary structure								T	T		S									T	T
Template Predicted Secondary structure
Template SS confidence
		612	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.