Job Description P33570 Confidence 100.00% Date Thu Jan 5 11:52:13 GMT 2012 Rank 30 Aligned Residues 494 % Identity 14% Template c2yicC_ PDB info PDB header:lyase Chain: C: PDB Molecule:2-oxoglutarate decarboxylase; PDBTitle: crystal structure of the suca domain of mycobacterium smegmatis2 alpha-ketoglutarate decarboxylase (triclinic form) Resolution 1.96 Å

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		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.				.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.																				.	.	.
Query SS confidence																																																.																				.	.	.
Query Sequence		G	P	L	G	Q	G	L	A	N	A	V	G	L	A	I	A	E	R	T	L	A	A	Q	F	N	Q	P	D	H	E	I	V	D	H	F	T	Y	V	F	M	G	D	G	C	L	M	.	E	G	I	S	H	E	V	C	S	L	A	G	T	L	G	L	G	K	L	.	.	.	I	G	F	Y	D	H	N	G	I	S	I
Query Conservation																																																.																				.	.	.
Alig confidence																					.	.	.																									.																		.		.	.	.
Template Conservation																					.	.	.																																											.
Template Sequence		S	H	L	E	A	V	D	P	V	L	E	G	L	V	R	A	K	Q	D	.	.	.	L	L	D	T	G	E	E	G	R	F	S	V	V	P	L	M	L	H	G	D	A	A	F	A	G	Q	G	V	V	A	E	T	L	N	L	A	L	L	R	G	Y	R	.	T	G	G	T	I	H	I	V	V	N	N	Q	I	G	F
Template Known Secondary structure		S	S	T	T	T	T														.	.	.		T	T		S	T	T																											T	T	T	T		T	T	T		.		S										S		B	T
Template Predicted Secondary structure																					.	.	.																																											.
Template SS confidence
		604	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.				.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.		.	.	.	.	.	670	.	.	.	.	.	.	.	.	.
		189	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230				.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure											.																																		.	.	.
Query SS confidence											.																																		.	.	.
Query Sequence		D	G	E	T	E	G	W	F	T	.	D	D	T	A	K	R	F	E	A	Y	H	W	H	V	I	H	E	I	D	G	H	D	P	Q	A	V	K	E	A	I	L	E	A	.	.	.	Q	S	V	K	D	K	P	S	L	I	I	C	R	T	V	I	G	F	G	S	P	N	K	A	G	K	E	E	A	H	G	A	P	L
Query Conservation											.																																		.	.	.
Alig confidence											.																		.																.	.	.																											.	.	.	.	.
Template Conservation																													.																																													.	.	.	.	.
Template Sequence		T	T	A	P	T	D	S	R	S	S	E	Y	C	T	D	V	A	K	M	I	G	A	P	I	F	H	V	.	N	G	D	D	P	E	A	C	A	W	V	A	R	L	A	V	D	F	R	Q	A	F	K	K	D	V	V	I	D	M	L	C	Y	R	R	R	G	H	N	E	G	D	D	P	.	.	.	.	.	S	M	T
Template Known Secondary structure		T	B							S	S	S	S	T	T	G	G	G	G	G	G	T							.		T	T																																	S		S	S	T	T			G	.	.	.	.	.	G	G	T
Template Predicted Secondary structure																													.																																													.	.	.	.	.
Template SS confidence
		683	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.		710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.						.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.			280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.														320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	E	E	E	V	A	L	A	R	Q	K	L	G	W	H	.	.	H	P	P	F	E	I	P	K	E	I	Y	H	A	W	D	A	R	E	K	G	E	K	A	Q	Q	S	W	N	E	K	F	A	A	Y	K	K	A	H	P	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	E	E	F	T	R	R	M	S
Query Conservation																	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	P	Y	M	Y	D	V	I	D	T	K	R	G	S	R	K	A	Y	T	E	A	L	I	G	R	G	D	I	S	M	K	E	A	E	D	A	L	R	D	Y	Q	G	Q	L	E	R	V	F	N	E	V	R	E	L	E	K	H	E	L	A	T	A	V	D	K	A	M	L	Q	R	I	G	D	A	H	L	A	L	P	E
Template Known Secondary structure										T	T															T	T	S	S																																															T	T				T
Template Predicted Secondary structure
Template SS confidence
		757	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.																					.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	G	L	P	K	D	W	E	K	T	T	Q	K	Y	I	N	E	L	Q	A	N	P	A	K	I	A	T	R	K	A	S	Q	N	T	L	N	A	Y	G	P	M	L	P	E	L	L	G	G	S	A	D	L	A	P	S	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	I	W
Query Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.
Template Sequence		G	F	T	V	H	P	R	V	R	P	V	L	E	K	R	R	E	M	A	Y	E	G	R	.	I	D	W	A	F	A	E	L	L	A	L	G	S	L	I	A	E	G	K	L	V	R	L	S	G	Q	D	T	Q	R	G	T	F	T	Q	R	H	A	V	I	V	D	R	K	T	G	E	E	F	T	P	L	Q	L	L	A
Template Known Secondary structure		T					T	T	T																.	B																T	T								T	T	T	T	T		T	T	S				S	S				T	T	T						G	G	G	G	G	G
Template Predicted Secondary structure																									.
Template SS confidence
		853	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.		.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.			430	.	.	.	.	.	.	.	.	.	440	.	.	.	.								.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
Predicted Secondary structure																																										.	.																.	.	.	.	.	.	.
Query SS confidence																																										.	.																.	.	.	.	.	.	.
Query Sequence		K	G	S	V	S	L	K	E	D	P	A	G	N	Y	I	H	Y	G	V	R	E	F	G	M	T	A	I	A	N	G	I	A	H	H	G	G	F	V	P	Y	.	.	T	A	T	F	L	M	F	V	E	Y	A	R	N	A	A	.	.	.	.	.	.	.	R	M	A	A	L	M	K	A	R	Q	I	M	V	Y	T	H
Query Conservation																																										.	.																.	.	.	.	.	.	.
Alig confidence																																										.	.																.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	N	P	D	G	T	P	T	G	G	K	F	L	V	Y	N	S	A	L	S	E	F	A	A	V	G	F	E	Y	G	Y	S	V	G	N	P	D	A	M	V	L	W	E	A	Q	F	G	D	F	V	N	G	A	Q	S	I	I	D	E	F	I	S	S	G	E	A	K	W	G	Q	L	S	D	V	V	L	L	L	P	H
Template Known Secondary structure		B		T	T	S		B		S										S		S															T	T	S							S	S	G	G	G	G	G	G	G							T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		932	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.
		461	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.			.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510		.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.																														.
Query SS confidence																							.	.																														.
Query Sequence		D	S	I	G	L	G	E	D	G	P	T	H	Q	A	V	E	Q	L	A	S	L	.	.	R	L	T	P	N	F	S	T	W	R	P	C	D	Q	V	E	A	A	V	G	W	K	L	A	V	E	R	H	N	.	G	P	T	A	L	I	L	S	R	Q	N	L	A	Q	V	E	R	T	P	D	Q	V	K	E	I	A	R
Query Conservation																							.	.																														.
Alig confidence		.	.	.																			.	.																														.
Template Conservation		.	.	.
Template Sequence		.	.	.	G	H	E	G	Q	G	P	D	H	T	S	G	R	I	E	R	F	L	Q	L	W	A	E	G	S	M	T	I	A	M	P	S	T	P	A	N	Y	F	H	L	L	R	R	H	G	K	D	G	I	Q	R	P	L	I	V	F	T	P	K	S	M	L	R	N	K	A	A	V	S	D	I	R	D	F	T	E	S
Template Known Secondary structure		.	.	.			S	S	S		T	T	S	S													T	T	S								S														S	S											S	G	G	G	G		T	T	S		B							S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					1012	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.
		538	.	540	.	.	.	.	.										.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.		.	.	.	.	.				.	600	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.																																																	.						.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.																																																	.						.	.	.
Query Sequence		G	G	Y	V	L	K	D	S	.	.	.	.	.	.	.	.	.	G	G	K	P	D	I	I	L	I	A	T	G	S	E	M	E	I	T	L	Q	A	A	E	K	L	A	G	E	G	R	N	V	R	V	V	S	L	P	S	T	D	I	F	D	A	Q	D	E	.	E	Y	R	E	S	.	.	.	V	L	P	S	N	V
Query Conservation										.	.	.	.	.	.	.	.	.																																																	.						.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.													.							.																													.						.	.	.
Template Conservation																															.							.
Template Sequence		K	F	R	S	V	L	E	E	P	M	Y	T	D	G	E	G	D	R	N	K	V	T	R	L	L	L	T	S	G	.	K	I	Y	Y	E	L	.	A	A	R	K	A	K	E	N	R	E	D	V	A	I	V	R	I	E	Q	L	A	P	L	P	R	R	R	L	A	E	T	L	D	R	Y	P	N	V	K	E	K	F	W
Template Known Secondary structure					S									T	S	S			G	G	G									S	.	T						.								T		T	T											S											T	T		T	T
Template Predicted Secondary structure																															.							.
Template SS confidence
		1089	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.		.	.	1120	.	.	.		.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.
		605	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	R	V	A	V	E	A	G	I	A	D	Y	W	Y	K	Y	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	Q	E	E	P	A	N	Q	G	A	W	P	S	F	G	L	T	L
Template Known Secondary structure							T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		1167	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.