Job Description P33570 Confidence 100.00% Date Thu Jan 5 11:52:13 GMT 2012 Rank 31 Aligned Residues 495 % Identity 14% Template c2xt6B_ PDB info PDB header:lyase Chain: B: PDB Molecule:2-oxoglutarate decarboxylase; PDBTitle: crystal structure of mycobacterium smegmatis alpha-ketoglutarate2 decarboxylase homodimer (orthorhombic form) Resolution 2.74 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.				.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.																				.	.	.
Query SS confidence																																															.																				.	.	.
Query Sequence		P	L	G	Q	G	L	A	N	A	V	G	L	A	I	A	E	R	T	L	A	A	Q	F	N	Q	P	D	H	E	I	V	D	H	F	T	Y	V	F	M	G	D	G	C	L	M	.	E	G	I	S	H	E	V	C	S	L	A	G	T	L	G	L	G	K	L	.	.	.	I	G	F	Y	D	H	N	G	I	S	I	D
Query Conservation																																															.																				.	.	.
Alig confidence																																															.																		.		.	.	.
Template Conservation																																																																	.
Template Sequence		H	L	E	A	V	D	P	V	L	E	G	L	V	R	A	K	Q	D	L	L	D	T	G	E	E	G	S	D	N	R	F	S	V	V	P	L	M	L	H	G	D	A	A	F	A	G	Q	G	V	V	A	E	T	L	N	L	A	L	L	R	G	Y	R	.	T	G	G	T	I	H	I	V	V	N	N	Q	I	G	F	T
Template Known Secondary structure		S	T	T	T	T															T	T	B	S	T	T	S	S	B	S																										T	T	T	T		T	T	T		.		S										S		B	T	T
Template Predicted Secondary structure																																																																	.
Template SS confidence
		605	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.		.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.
		190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230				.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure										.																																		.	.	.
Query SS confidence										.																																		.	.	.
Query Sequence		G	E	T	E	G	W	F	T	.	D	D	T	A	K	R	F	E	A	Y	H	W	H	V	I	H	E	I	D	G	H	D	P	Q	A	V	K	E	A	I	L	E	A	.	.	.	Q	S	V	K	D	K	P	S	L	I	I	C	R	T	V	I	G	F	G	S	P	N	K	A	G	K	E	E	A	H	G	A	P	L	G
Query Conservation										.																																		.	.	.
Alig confidence										.													.																					.	.	.																												.	.	.	.	.
Template Conservation																							.																																																			.	.	.	.	.
Template Sequence		T	A	P	T	D	S	R	S	S	E	Y	C	T	D	V	A	K	M	I	G	A	.	P	I	F	H	V	N	G	D	D	P	E	A	C	A	W	V	A	R	L	A	V	D	F	R	Q	A	F	K	K	D	V	V	I	D	M	L	C	Y	R	R	R	G	H	N	E	G	D	D	P	S	.	.	.	.	.	M	T	Q
Template Known Secondary structure		B							S	S	S	S	T	T	G	G	G	G	G	G	T		.							T	T																																	S		S	S	S	S			G	G	.	.	.	.	.	G	T
Template Predicted Secondary structure																							.																																																			.	.	.	.	.
Template SS confidence
		684	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.		.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.						.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		E	E	E	V	A	L	A	R	Q	K	L	G	.	W	H	H	P	P	F	E	I	P	K	E	I	Y	H	A	W	D	A	R	E	K	G	E	K	A	Q	Q	S	W	N	E	K	F	A	A	Y	K	K	A	H	P	Q	L	A	E	E	F	T	R	R	M	S	G	G	L	P	K	D	W	E	K	T	T	Q	K	Y	I
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		P	Y	M	Y	D	V	I	D	T	K	R	G	S	R	K	A	Y	T	E	A	L	I	G	R	G	D	I	S	M	K	E	A	E	D	A	L	R	D	Y	Q	G	Q	L	E	R	V	F	N	E	V	R	E	L	A	T	A	V	D	K	A	M	L	Q	R	I	G	D	A	H	L	A	L	P	E	G	F	T	V	H	P
Template Known Secondary structure									T	T																T	S	S																																										T	T				T	T					T
Template Predicted Secondary structure
Template SS confidence
		758	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.
		345	.	.	.									.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.														.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Query Sequence		N	E	L	Q	.	.	.	.	.	.	.	.	A	N	P	A	K	I	A	T	R	K	A	S	Q	N	T	L	N	A	Y	G	P	M	L	P	E	L	L	G	G	S	A	D	L	A	P	S	N	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	I	W	K	G	S	V	S	L	K	E	D	.	.	.	.	.
Query Conservation						.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Template Conservation
Template Sequence		R	V	R	P	V	L	E	K	R	R	E	M	A	Y	E	G	R	I	D	W	A	F	A	E	L	L	A	L	G	S	L	I	A	E	G	K	L	V	R	L	S	G	Q	D	T	Q	R	G	T	F	T	Q	R	H	A	V	I	V	D	R	K	T	G	E	E	F	T	P	L	Q	L	L	A	T	N	P	D	G	T	P
Template Known Secondary structure		T	T																B																T	T								T	T	T	T	T		T	T	S				S	S				T	T	T						G	G	G	G	G	G	B		T	T	S		B
Template Predicted Secondary structure
Template SS confidence
		859	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.
				399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.			430	.	.	.	.	.	.	.	.	.	440	.	.	.	.								.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																																.	.																.	.	.	.	.	.	.
Query SS confidence		.	.																																.	.																.	.	.	.	.	.	.
Query Sequence		.	.	P	A	G	N	Y	I	H	Y	G	V	R	E	F	G	M	T	A	I	A	N	G	I	A	H	H	G	G	F	V	P	Y	.	.	T	A	T	F	L	M	F	V	E	Y	A	R	N	A	A	.	.	.	.	.	.	.	R	M	A	A	L	M	K	A	R	Q	I	M	V	Y	T	H	D	S	I	G	L	G	E
Query Conservation		.	.																																.	.																.	.	.	.	.	.	.
Alig confidence		.	.																																.	.																.	.	.	.	.	.	.																					.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		T	G	G	K	F	L	V	Y	N	S	A	L	S	E	F	A	A	V	G	F	E	Y	G	Y	S	V	G	N	P	D	A	M	V	L	W	E	A	Q	F	G	D	F	V	N	G	A	Q	S	I	I	D	E	F	I	S	S	G	E	A	K	W	G	Q	L	S	D	V	V	L	L	L	P	H	G	H	E	G	.	.	.
Template Known Secondary structure			S										S		S															T	T								S	S	G	G	G	G	G	G	G							T	T	T	T																				S	S	.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		939	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.
		468	.	470	.	.	.	.			.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.			510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.
Predicted Secondary structure									.	.																																				.	.
Query SS confidence									.	.																																				.	.
Query Sequence		D	G	P	T	H	Q	A	.	.	V	E	Q	L	A	S	L	R	L	T	P	N	F	S	T	W	R	P	C	D	Q	V	E	A	A	V	G	W	K	L	A	V	E	R	H	.	.	N	G	P	T	A	L	I	L	S	R	Q	N	L	A	Q	V	E	R	T	P	D	Q	V	K	E	I	A	R	G	G	Y	V	L	K
Query Conservation									.	.																																				.	.
Alig confidence									.	.																																				.	.		.																.
Template Conservation																																																	.																.
Template Sequence		Q	G	P	D	H	T	S	G	R	I	E	R	F	L	Q	L	W	A	E	G	S	M	T	I	A	M	P	S	T	P	A	N	Y	F	H	L	L	R	R	H	G	K	D	G	I	Q	R	.	P	L	I	V	F	T	P	K	S	M	L	R	N	K	A	.	A	V	S	D	I	R	D	F	T	E	S	K	F	R	S	V
Template Known Secondary structure		S		T	T	S	S													T	T	S							S	S														S	S				.								S	G	G	G	S		S	S	.	S		B							S					S
Template Predicted Secondary structure																																																	.																.
Template SS confidence
		1016	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.		.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.		.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.
		544	.	.											.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.		.	.	.	.	.				.	600	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.																																																.						.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.																																																.						.	.	.
Query Sequence		D	S	G	.	.	.	.	.	.	.	.	.	.	G	K	P	D	I	I	L	I	A	T	G	S	E	M	E	I	T	L	Q	A	A	E	K	L	A	G	E	G	R	N	V	R	V	V	S	L	P	S	T	D	I	F	D	A	Q	D	E	.	E	Y	R	E	S	.	.	.	V	L	P	S	N	V	A	A	R	V	A
Query Conservation					.	.	.	.	.	.	.	.	.	.																																																.						.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.												.												.																								.						.	.	.
Template Conservation																										.												.
Template Sequence		L	E	E	P	M	Y	T	D	G	E	G	D	R	N	K	V	T	R	L	L	L	T	S	G	.	K	I	Y	Y	E	L	A	A	R	K	A	.	K	E	N	R	E	D	V	A	I	V	R	I	E	Q	L	A	P	L	P	R	R	R	L	A	E	T	L	D	R	Y	P	N	V	K	E	K	F	W	V	Q	E	E	P
Template Known Secondary structure									T	S				S	T	T									S	.	T											.			T		T	T							S				S											T	T		T	T
Template Predicted Secondary structure																										.												.
Template SS confidence
		1094	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.		.	.	1120	.	.	.	.	.	.	.	.		.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.
		610	.	.	.	.	.	.	.	.	.	620	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	A	G	I	A	D	Y	W	Y	K	Y	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	N	Q	G	A	W	P	S	F	G	L	T	L
Template Known Secondary structure		T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		1172	.	.	.	.	.	.	.	1180	.	.	.	.