Job Description P33570 Confidence 99.24% Date Thu Jan 5 11:52:13 GMT 2012 Rank 78 Aligned Residues 120 % Identity 18% Template c2vbgB_ PDB info PDB header:lyase Chain: B: PDB Molecule:branched-chain alpha-ketoacid decarboxylase; PDBTitle: the complex structure of the branched-chain keto acid2 decarboxylase (kdca) from lactococcus lactis with 2r-1-3 hydroxyethyl-deazathdp Resolution 1.80 Å

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		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		T	T	G	P	L	G	Q	G	L	A	N	A	V	G	L	A	I	A	E	R	T	L	A	A	Q	F	N	Q	P	D	H	E	I	V	D	H	F	T	Y	V	F	M	G	D	G	C	L	M	E	G	I	S	H	E	V	C	S	L	A	G	T	L	G	L	G	K	L	I	G	F	Y	D	H	N	G	I	S	I	.	.
Query Conservation																																																																																.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.																													.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Sequence		L	W	G	S	I	G	Y	T	F	P	A	A	L	G	S	Q	I	A	D	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	S	R	H	L	L	F	I	G	D	G	S	L	Q	.	.	L	T	V	Q	E	L	G	L	S	I	R	E	K	L	N	P	I	C	F	I	I	N	N	D	G	Y	T	V	E	R
Template Known Secondary structure		T	T			T	T	T													T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S													.	.			G	G	G							T	T										S	S	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template SS confidence
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.															420	.	.	.	.	.	.	.	.	.	430	.	.	.			.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
							189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.			.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																													.	.
Query SS confidence		.	.	.	.	.																													.	.
Query Sequence		.	.	.	.	.	D	G	E	T	E	G	W	F	T	D	D	T	A	K	R	F	E	A	Y	H	W	H	V	I	H	E	I	D	.	.	G	H	D	P	Q	A	V	K	E	A	I	L	E	A	Q	S	V	K	D	K	P	S	L	I	I	C	R	T	V	I
Query Conservation		.	.	.	.	.																													.	.
Alig confidence		.	.	.	.	.																													.	.
Template Conservation
Template Sequence		E	I	H	G	P	T	Q	S	Y	N	D	I	P	M	W	N	Y	S	K	L	P	E	T	F	G	A	T	E	D	R	V	V	S	K	I	V	R	T	E	N	E	F	V	S	V	M	K	E	A	Q	A	D	V	N	R	M	Y	W	I	E	L	V	L	E	K
Template Known Secondary structure				S		T	T		G	G	G							G	G	G					T	T			T	T	T								B															T	T	S										T
Template Predicted Secondary structure
Template SS confidence
		464	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions