 |
Job Description | P33570 | Confidence | 99.20% | Date | Thu Jan 5 11:52:13 GMT 2012 |
Rank | 85 | Aligned Residues | 113 |
% Identity | 19% | Template | c2q27B_ |
PDB info |
PDB header:lyase | Chain: B: PDB Molecule:oxalyl-coa decarboxylase; |
PDBTitle: crystal structure of oxalyl-coa decarboxylase from escherichia coli
|
Resolution | 2.12 Å |
|
 |
  |   |
111 | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
| . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Query Sequence |   |
T | T | G | P | L | G | Q | G | L | A | N | A | V | G | L | A | I | A | E | R | T | L | A | A | Q | F | N | Q | P | D | H | E | I | V | D | H | F | T | Y | V | F | M | G | D | G | C | L | M | E | G | I | S | H | E | V | C | S | L | A | G | T | L | G | L | G | K | L | I | G | F | Y | D | H | N | G | I | S | I | D | . |
Query Conservation |   |
  |
|
|   |   |
|   |
|
|
|   |
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|   |   |   |
|
|   |   |   |
|
|
|
|   |
|   |   |   |   |
|   |
|
|
|   |
|   |
|   |
|   |   |
|
|
| . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Template Conservation |   |
  |   |
|   |
|
|   |   |
|   |   |
|
|
|
|
|
|
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|
|   |
|   |
|
|
|
|
|   |   |   |   |   | . | . |   |
|   |
|
|   |   |   |   |
|   |
|   |
|
|
|   |
|
|   |   |   |   |   |   |   |
Template Sequence |   |
T | W | G | V | M | G | I | G | M | G | Y | A | I | G | A | S | V | T | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | S | P | V | V | A | I | E | G | D | S | A | F | G | F | S | G | M | . |
. |
E | I | E | T | I | C | R | Y | N | L | P | V | T | I | V | I | F | N | N | G | G | I | Y | R | G | D |
Template Known Secondary structure |   |
T | T | T |
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  | T | T | T | G | G | . | . | G |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |
| S | B | S | S |
| S |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |
|
|  |  |  |  |
|
|  |  | . | . |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
419 | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | |
|
. | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . |
  |
  |   |
|
|
|
|
|
|
|
|
|
|
190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | E | T | E | G | W | F | T | D | D | T | A | K | R | F | E | A | Y | H | W | H | V | I | H | E | I | D | G | H | D | P | Q | A | V | K | E | A | I | L | E | A | Q | S | V | K | D | K | P | S | L | I | I | C | R | T |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|
|   |
|   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |
|
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|   |
|   |   |   |   |   |
| . | . | . |   |   |   |   |
|
|   |   |
|
|   |   |   |   |   |   | . |   |   |
|   |
|
|
|
|   |   |
Template Sequence |   |
G | V | D | L | S | G | A | G | A | P | S | P | T | D | L | L | H | H | A | R | Y | D | K | L | M | D | A | F | R | G | V | G | Y | N | V | . |
. |
. |
T | T | T | D | E | L | R | H | A | L | T | T | G | I | Q | S | . |
R | K | P | T | I | I | N | V | V | I |
Template Known Secondary structure |   |
|
|
| T | T | S | S |
|
|
|
| T | T | B |
|
| T | T |
|
| G | G | G | G | G | G | G | G | T |
|  |  |  |  |  | . | . | . |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | T | S |
|  |  |  |  |  |  | B |
Template Predicted Secondary structure |   |
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
482 | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | |
|
|
. | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | |
. | . | . | . | . | . | . | 540 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|