Job Description P33570 Confidence 99.32% Date Thu Jan 5 11:52:13 GMT 2012 Rank 68 Aligned Residues 197 % Identity 18% Template c2c3yA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:pyruvate-ferredoxin oxidoreductase; PDBTitle: crystal structure of the radical form of2 pyruvate:ferredoxin oxidoreductase from desulfovibrio3 africanus Resolution 1.93 Å

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		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	F	G	M	T	A	I	A	N	G	I	A	H	H	G	G	F	V	P	Y	T	A	T	F	L	M	F	V	E	Y	A	R	N	A	A	R	M	A	A	L	M	K	A	R	Q	I	M	V	Y	T	H	D	S	I	G	L	G	E	D	G	P	T	H	Q	A	V	E	Q	L	A	S	L	R	L	T	P	N	F	S
Query Conservation
Alig confidence																		.																																							.																					.
Template Conservation																		.																																							.																					.
Template Sequence		S	E	A	G	A	A	G	A	V	H	G	A	L	A	A	G	.	A	L	T	T	T	F	T	A	S	Q	G	L	L	L	M	I	P	N	M	Y	K	I	S	G	E	L	L	P	G	V	F	H	V	T	A	R	A	I	.	A	A	H	A	L	S	I	F	G	D	H	Q	D	I	Y	A	A	R	Q	T	.	G	F	A
Template Known Secondary structure		S														T	T	.																									T	T										B			.		S	S	S				S	B		S						T	T	T	S	.	S
Template Predicted Secondary structure																		.																																							.																					.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.
		489	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.				.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.																										.	.	.	530	.	.	.	.	.	.	.	.	.	540
Predicted Secondary structure																				.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	W	R	P	C	D	Q	V	E	A	A	V	G	W	K	L	A	V	.	.	.	E	R	H	N	G	P	T	A	L	I	L	S	R	Q	N	L	A	Q	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	T	P	D	Q	V	K	E	I	A	R	G	G	Y
Query Conservation																				.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	L	A	S	S	S	V	Q	E	A	H	D	M	A	L	V	A	H	L	A	A	I	E	S	N	V	P	F	M	H	F	F	D	G	F	R	T	S	H	E	I	Q	K	I	E	V	L	D	Y	A	D	M	A	S	L	V	N	Q	K	A	L	A	E	F	R	A	K	S	M	N	P	E	H	P	H	V	R	G	T	A
Template Known Secondary structure							S																												T	T	T	T	T	S																	S												S			T	T	S					S
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
																																											541	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	L	K	D	S	G	G	K	P	D	I	I	L	I	A	T	G	S	E	M	E	I	T	L	Q	A	A	E	K	L	A	G	E	G	R	N	V	R	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	N	P	D	I	Y	F	Q	G	R	E	A	A	N	P	Y	Y	L	K	V	P	G	I	V	A	E	Y	M	Q	K	V	A	S	L	T	G	R	S	Y	K	L	F	D	Y	V	G	A	P	D	A	E	R	V	I	V	S	M	G	S	S	C	E	T	I	E	E	V	I	N	H	L	A	A	K	G	E	K	I	G	L
Template Known Secondary structure				T	T	T							T	T																							S					S							T	T		S							T	T														T	T	T
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	L	P	S	T	D	I	F	D	A	Q	D	E	E	Y	R	E	S	V	L	P	S	N	V	A	A	R	V	A	V	E
Query Conservation
Alig confidence													.	.	.
Template Conservation													.	.	.
Template Sequence		I	K	V	R	L	Y	R	P	F	V	S	.	.	.	E	A	F	F	A	A	L	P	A	S	A	K	V	I	T	V	L	D
Template Known Secondary structure					S				S				.	.	.						S	S		T	T
Template Predicted Secondary structure													.	.	.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310				.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions