 |
Job Description | P33570 | Confidence | 99.11% | Date | Thu Jan 5 11:52:13 GMT 2012 |
Rank | 89 | Aligned Residues | 120 |
% Identity | 16% | Template | c1ovmC_ |
PDB info |
PDB header:lyase | Chain: C: PDB Molecule:indole-3-pyruvate decarboxylase; |
PDBTitle: crystal structure of indolepyruvate decarboxylase from2 enterobacter cloacae
|
Resolution | 2.65 Å |
|
 |
  |   |
111 | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | |
|
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
| . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
Query Sequence |   |
T | T | G | P | L | G | Q | G | L | A | N | A | V | G | L | A | I | A | E | R | T | L | A | A | Q | F | N | Q | P | D | H | E | I | V | D | H | F | T | Y | V | F | M | G | D | G | C | L | M | E | G | I | S | H | E | V | C | S | L | A | G | T | L | G | L | G | K | L | I | G | F | Y | D | H | N | G | I | S | I | . |
. |
Query Conservation |   |
  |
|
|   |   |
|   |
|
|
|   |
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|   |   |   |
|
|   |   |   |
|
|
|
|   |
|   |   |   |   |
|   |
|
|
|   |
|   |
|   |
|   |   |
|
| . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
Template Conservation |   |
  |   |   |   |
|
|   |   |
|   |   |
|
|
|
|
|
|
|   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|
|   |
|   |
|
|
|
|
|   | . | . |   |   |   |   |
|
|   |
|
|   |   |   |   |   |   |
|   |
|
|
|   |
|
|   |   |   |   |   |   |   |
Template Sequence |   |
L | W | G | S | I | G | Y | T | L | A | A | A | F | G | A | Q | T | A | C | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | R | R | V | I | V | L | T | G | D | G | A | A | Q | . |
. |
L | T | I | Q | E | L | G | S | M | L | R | D | K | Q | H | P | I | I | L | V | L | N | N | E | G | Y | T | V | E | R |
Template Known Secondary structure |   |
T | T |
|
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |
| T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | S |
|  |  |  |  |  |  |  |  |  |  |  | . | . |  | T | T | T |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |  |  |  | S | S | S |
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |
|
|  |  |  |  | . | . |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
406 | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 430 | . | . | . | . | . | . | . | . | . | |
|
440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
|
189 | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | |
. | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . |
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  | . |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
D | G | E | T | E | G | W | F | T | D | D | T | A | K | R | F | E | A | Y | H | W | H | V | I | . |
H | E | I | D | G | H | D | P | Q | A | V | K | E | A | I | L | E | A | Q | S | V | K | D | K | P | S | L | I | I | C | R | T | V | I | G |
Query Conservation |   |
. | . | . | . | . |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
| . |   |   |   |
|
|   |
|   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |
|
|
Alig confidence |   |
. | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |   |
|
|   |   |
|   |   |   |   | . |
|
|   |
|
|
|
|   |
|
|   |   |
Template Sequence |   |
A | I | H | G | A | E | Q | R | Y | N | D | I | A | L | W | N | W | T | H | I | P | Q | A | L | S | L | D | P | Q | S | E | C | W | R | V | S | E | A | E | Q | L | A | D | V | L | E | K | V | A | H | H | E | . |
R | L | S | L | I | E | V | M | L | P | K | A |
Template Known Secondary structure |   |
 |  | S |
| T | T |
| G | G | G |
|
|
|
|
|
| G | G | G | S | T | T | T | S |
| S | S |
|
|  |  |  |  |  |  |
| B |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S | . | S |  |  |  |  |  |  |  |
|
| T | T |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |  |
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | |
. | . | . | . | . | . | . | . | 530 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|