Return to main results Retrieve Phyre Job Id

Job DescriptionP11664
Confidence99.40%DateThu Jan 5 11:32:49 GMT 2012
Rank14Aligned Residues162
% Identity16%Templated1jjva_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nucleotide and nucleoside kinases
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   43......50.........60.........70.........80.........90........ .100.........110.........120
Predicted Secondary structure 



























..




Query SS confidence 























































. .





















Query Sequence  RTVVFLCAPPGTGKSTLTTFWEYLAQQDPELPAIQTLPMDGFHHYNSWLDAHQLRP. . FKGAPETFDVAKLTENLRQVVE
Query Conservation    



 
 








  
   
        
  
  
                ..        
   
   
  
  
Alig confidence 
























........






















..





















Template Conservation    

 
 
  







  
   
........   
  
                              
         
Template Sequence  TYIVGLTGGIGSGKTTIANLFTDLG. . . . . . . . VPLVDADVVAREVVAKDSPLLSKIVEHFGAQILNRAALRERVFNHDE
Template Known Secondary structure 

STTS
TTT........

TT
SS

TT


T
Template Predicted Secondary structure 








........













Template SS confidence 















































































   2.......10.........20...... ...30.........40.........50.........60.........70...
 
   121. .......130.........140.........150.........160.........170.........180.........190........
Predicted Secondary structure 

..

























Query SS confidence 

. .











































































Query Sequence  GD. . CTWPQYDRQKHDPVEDALHVTAPLVIVEGNWLLLDDEKWLELASFCDFSIFIHAPAQILRERLISRKIAGGLTRQV
Query Conservation 
 ..
  
 

                 




  

        
    
  
 

   
    
 
 

   
 
 
 
Alig confidence 

..



































.....
























........

Template Conservation              
                           .....     
  
 
         
   
........  
Template Sequence  DKLWLNNLLHPAIRERMKQKLAEQTAPYTLFVVPLLIENK. . . . . LTALCDRILVVDVSPQTQLARSANF. . . . . . . . EQ
Template Known Secondary structure  T

SS
TTTTTTT.....
GGG
S



........
Template Predicted Secondary structure 









.....






........
Template SS confidence 















































































   80.........90.........100.........110......... 120.........130.........140.... ..
 
   199200.........210.........220.........230
Predicted Secondary structure 










Query SS confidence 































Query Sequence  AEAFYARTDGPNVERVLMNSRQANLIVEMTEE
Query Conservation 
              
      

 

    
Alig confidence 
















.....









Template Conservation                   .....

 



   
Template Sequence  IQRIMNSQVSQQERLKW. . . . . ADDVINNDAE
Template Known Secondary structure  S

.....
S

S
Template Predicted Secondary structure 


.....





Template SS confidence 































   152.......160........ .170........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions