Return to main results Retrieve Phyre Job Id

Job DescriptionP11664
Confidence96.85%DateThu Jan 5 11:32:49 GMT 2012
Rank258Aligned Residues129
% Identity18%Templatec3nbxX_
PDB info PDB header:hydrolaseChain: X: PDB Molecule:atpase rava; PDBTitle: crystal structure of e. coli rava (regulatory atpase variant a) in2 complex with adp
Resolution2.91 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   46...50.........60.........70.........80.........90.........100... ......110....
Predicted Secondary structure 






























...........
Query SS confidence 

























































. . . . . . . . . . .










Query Sequence  VFLCAPPGTGKSTLTTFWEYLAQQDPELPAIQTLPMDGFHHYNSWLDAHQLRPFKGAP. . . . . . . . . . . ETFDVAKLTEN
Query Conservation 


 
 








  
   
        
  
  
                     ...........   
   
   
Alig confidence 





















....































...........










Template Conservation 


 
 





 


 

   ....          
    
 

 
        
 
  
 
 




  
    
 

Template Sequence  VFLLGPPGIAKSLIARRLKFAF. . . . QNARAFEYLMTRFSTPEEVFGPLSERLTSGYLPEAEIVFLDEIWKAGPAILNTL
Template Known Secondary structure 

SSSSGGGGB....SS



TT



B

B

TTSGGG
SSGGG

Template Predicted Secondary structure 




....





























Template SS confidence 















































































   42.......50.........60... ......70.........80.........90.........100.........110.......
 
   115....120.........130.........140.........150.........160.........170.........180........
Predicted Secondary structure 
























Query SS confidence 









































































Query Sequence  LRQVVEGDCTWPQYDRQKHDPVEDALHVTAPLVIVEGNWLLLDDEKWLELASFCDFSIFIHAPAQILRERLISR
Query Conservation 
  
  
 
  
 

                 




  

        
    
  
 

   
    
 
 
Alig confidence 










..........




















































Template Conservation 
  
 

    ..........      

    





 

    











 
           

 
Template Sequence  LTAINERQFRN. . . . . . . . . . GAHVEKIPMRLLVAASNELPEADSSLEALYDRMLIRLWLDKVQDKANFRSMLT
Template Known Secondary structure  SS
..........SSS



SS


TT
TTTT



S


T
Template Predicted Secondary structure 


..........





















Template SS confidence 









































































   128.130........ .140.........150.........160.........170.........180.........190.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions