Return to main results Retrieve Phyre Job Id

Job DescriptionP11664
Confidence98.12%DateThu Jan 5 11:32:49 GMT 2012
Rank111Aligned Residues37
% Identity22%Templatec3lv8A_
PDB info PDB header:transferaseChain: A: PDB Molecule:thymidylate kinase; PDBTitle: 1.8 angstrom resolution crystal structure of a thymidylate kinase2 (tmk) from vibrio cholerae o1 biovar eltor str. n16961 in complex3 with tmp, thymidine-5'-diphosphate and adp
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   42.......50.........60.........70........
Predicted Secondary structure 












Query SS confidence 




































Query Sequence  RRTVVFLCAPPGTGKSTLTTFWEYLAQQDPELPAIQT
Query Conservation     



 
 








  
   
        
  
Alig confidence 




































Template Conservation    


 
 
  





 
  

  
           
Template Sequence  NAKFIVIEGLEGAGKSTAIQVVVETLQQNGIDHITRT
Template Known Secondary structure 


STTS
TT


Template Predicted Secondary structure 













Template SS confidence 




































   2.......10.........20.........30........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions