 |
Job Description | P11664 | Confidence | 95.23% | Date | Thu Jan 5 11:32:49 GMT 2012 |
Rank | 476 | Aligned Residues | 73 |
% Identity | 16% | Template | c3k1jA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:atp-dependent protease lon; |
PDBTitle: crystal structure of lon protease from thermococcus onnurineus na1
|
Resolution | 2.00 Å |
|
 |
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | |
|
. | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |
|
|
|  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | I | Q | A | Q | Y | Q | N | E | E | I | E | N | V | H | . |
. |
K | P | L | L | H | M | L | A | A | L | Q | T | V | N | P | Q | R | R | T | V | V | F | L | C | A | P | P | G | T | G | K | S | T | L | T | T | F | W | E | Y | L | A | Q | Q | D | P | E | L | P | A | I | Q | T | L | P | M | D | G | F | H | H | Y |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |
|   | . | . |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|   |
|
|
|
|
|
|
|
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |   | . | . | . | . |
|
|
|   |
|   |
|
|   |
|
|
|   |
|
|
|
|
|
|   |   |
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
T | E | E | I | E | V | P | E | K | L | I | D | Q | V | I | G | Q | E | H | A | V | E | V | I | K | T | A | A | N | Q | K | R | H | . |
. |
. |
. |
V | L | L | I | G | E | P | G | T | G | K | S | M | L | G | Q | A | M | A | E | L | L | P | T | E | T | L | E | D | I | L | V | F | P | N | P | E | D | E | N | M | P |
Template Known Secondary structure |   |
G | G | G | S |
|
|
| S | S |  |  |  |  |
|
| S |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| . | . | . | . |  |  |  |  |
|
| T | T | S | S |  |  |  |  |  |  |  |  |  |  | T | S |
|
| S | S |
|  |  |  |  |  |  |
|
| T | T |
| T | T | S |
|
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
|
|
|
. | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|