Job Description P11664 Confidence 98.95% Date Thu Jan 5 11:32:49 GMT 2012 Rank 44 Aligned Residues 175 % Identity 10% Template c2pbrB_ PDB info PDB header:transferase Chain: B: PDB Molecule:thymidylate kinase; PDBTitle: crystal structure of thymidylate kinase (aq_969) from aquifex aeolicus2 vf5 Resolution 1.96 Å

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		V	V	F	L	C	A	P	P	G	T	G	K	S	T	L	T	T	F	W	E	Y	L	A	Q	Q	D	P	E	L	P	A	I	Q	T	L	P	M	D	G	F	H	H	Y	N	S	W	L	D	A	H	Q	L	R	P	F	K	G	A	P	E	T	F	D	V	A	K	L	T	E	N	L	R	Q	V	V	E	G	D	.	C
Query Conservation																																																																																.
Alig confidence																																								.	.	.																																						.
Template Conservation																																								.	.	.
Template Sequence		L	I	A	F	E	G	I	D	G	S	G	K	T	T	Q	A	K	K	L	Y	E	Y	L	K	Q	K	G	Y	F	V	S	L	Y	R	E	P	G	G	.	.	.	T	K	V	G	E	V	L	R	E	I	L	L	T	E	E	L	D	E	R	T	E	L	L	L	F	E	A	S	R	S	K	L	I	E	E	K	I	I	P
Template Known Secondary structure									T	T	S																T	T								S	S		S	.	.	.	S													S																						T
Template Predicted Secondary structure																																								.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	W	P	Q	Y	D	R	Q	K	H	D	P	V	E	D	A	L	H	V	T	A	P	L	V	I	V	E	G	N	W	L	L	L	D	D	E	K	W	L	E	L	A	S	F	C	D	F	S	I	F	I	H	A	P	A	Q	I	L	R	E	R	L	I	S	R	K	I	A	G	G	L	T	R	Q	V	A	E	A	F	Y
Query Conservation
Alig confidence																																																																				.	.	.
Template Conservation																																																																				.	.	.
Template Sequence		D	L	K	R	D	K	V	V	I	L	D	R	F	V	L	S	T	I	A	Y	Q	G	Y	G	K	G	L	D	V	E	F	I	K	N	L	N	E	F	A	T	R	G	V	K	P	D	I	T	L	L	L	D	I	P	V	D	I	A	L	R	R	L	K	E	K	N	.	.	.	R	F	E	N	K	E	F	L	E	K	V
Template Known Secondary structure					T	T							S										T	T	T	T																T	T				S																		T	T	T	.	.	.
Template Predicted Secondary structure																																																																				.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.				.	.	.	.	.	150	.	.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	T	D	G	P	N	V	E	R	V	L	M	N	S	R	Q	A	N	L	I	V	E	M	T	E	E
Query Conservation
Alig confidence												.	.	.	.	.
Template Conservation												.	.	.	.	.
Template Sequence		R	K	G	F	L	E	L	A	K	E	.	.	.	.	.	E	E	N	V	V	V	I	D	A	S	G	E
Template Known Secondary structure												.	.	.	.	.	S	T	T						T	T	S
Template Predicted Secondary structure												.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.						.	.	.	.	170	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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