Return to main results Retrieve Phyre Job Id

Job DescriptionP11664
Confidence98.91%DateThu Jan 5 11:32:49 GMT 2012
Rank52Aligned Residues172
% Identity12%Templatec2jatA_
PDB info PDB header:transferaseChain: A: PDB Molecule:deoxyguanosine kinase; PDBTitle: structure of deoxyadenosine kinase from m.mycoides with2 products dcmp and a flexible dcdp bound
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   45....50.........60.........70.........80.........90.........100.........110.........120....
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  VVFLCAPPGTGKSTLTTFWEYLAQQDPELPAIQTLPMDGFHHYNSWLDAHQLRPFKGAPETFDVAKLTENLRQVVEGDCT
Query Conservation 



 
 








  
   
        
  
  
                        
   
   
  
  
 
 
Alig confidence 

























............









































Template Conservation   
 
 
  







  

  
   ............                                          
Template Sequence  KIAIFGTVGAGKSTISAEISKKLGYE. . . . . . . . . . . . IFKEPVEENPYFEQYYKDLKKTVFKMQIYMLTARSKQLKQLE
Template Known Secondary structure 
STTSS

............


TTT
TTTT
T


Template Predicted Secondary structure 








............











Template SS confidence 















































































   2.......10.........20....... ..30.........40.........50.........60.........
 
   125....130.........140.........150.........160.........170.........180.........190.........200....
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  WPQYDRQKHDPVEDALHVTAPLVIVEGNWLLLDDEKWLELASFCDFSIFIHAPAQILRERLISRKIAGGLTRQVAEAFYA
Query Conservation   
 

                 




  

        
    
  
 

   
    
 
 

   
 
 
 
     
Alig confidence 































































..













Template Conservation                                                   
         
   
..              
Template Sequence  NIIFDRTLLEDPIFMKVNYDLNNVDQTDYNTYIDFYNNVVLLSFDIVIYLRVSTKTAISRIKKR. . GRSEELLIGEEYWE
Template Known Secondary structure  SS
TTTTTSS
TT



S

..S
S
S
Template Predicted Secondary structure 



















..





Template SS confidence 















































































   73......80.........90.........100.........110.........120.........130...... ...140.........150
 
   205....210.........220... ......230
Predicted Secondary structure 






.



Query SS confidence 


















.






Query Sequence  RTDGPNVERVLMNSRQANL. IVEMTEE
Query Conservation           
      

 .

    
Alig confidence 


















.






Template Conservation                     
 

    
Template Sequence  TLNKNYEEFYKQNVYDFPFFVVDAELD
Template Known Secondary structure  TTTTTTTS
Template Predicted Secondary structure 







Template SS confidence 


























   160.........170.........180......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions