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Job DescriptionP11664
Confidence99.02%DateThu Jan 5 11:32:49 GMT 2012
Rank38Aligned Residues167
% Identity18%Templatec2gksB_
PDB info PDB header:transferaseChain: B: PDB Molecule:bifunctional sat/aps kinase; PDBTitle: crystal structure of the bi-functional atp sulfurylase-aps kinase from2 aquifex aeolicus, a chemolithotrophic thermophile
Resolution2.31 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.........60.........70.........80.........90.........100......
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Query Sequence  PLLHMLAALQTVNPQRRTVVFLCAPPGTGKSTLTTFWEYLAQQDPELPAIQTLPMDGFHHYNSWLDAHQLRPFKGAPETF
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Template Sequence  EVAEILAETYVPKHKQGFCVWLTGLPCAGKSTIAEILATMLQARG. . RKVTLLDGDVV. . . RTHLSRGLGFSKED. . RIT
Template Known Secondary structure  S

GGGS

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   356...360.........370.........380.........390.........400 .........410. ........420..... ...
 
   107..110.........120.........130.........140.........150.........160......... 170.........180..
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Query Sequence  DVAKLTENLRQVVEGDCTWPQYDRQKHDPVEDALHVTAPLVIVEGNWLLLDDEKWLELASFCD. . . . FSIFIHAPAQILR
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Template Sequence  NILRVGFVASEIVKH. . . . . . . . . . . . . . . . . . . . . . NGVVICALVSPY. . RSARNQVRNMMEEGKFIEVFVDAPVEVCE
Template Known Secondary structure  T......................T





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   429430.........440... ......450..... ....460.........470.........480....
 
   183......190.........200.........210.........220.........230.
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Query Sequence  ERLISRKIAGGLTRQVAEAFYARTDGPNVERVLMNSRQANLIVEMTEEG
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Template Sequence  ERDVKG. . . . . LYKKAKEGLIKGFTGVDDPYEPP. . VAPEVRVDTTKLT
Template Known Secondary structure  TTT

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   485....490 .........500.........510... ......520......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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