 |
Job Description | P11664 | Confidence | 95.82% | Date | Thu Jan 5 11:32:49 GMT 2012 |
Rank | 407 | Aligned Residues | 68 |
% Identity | 9% | Template | c2dfsA_ |
PDB info |
PDB header:contractile protein/transport protein | Chain: A: PDB Molecule:myosin-5a; |
PDBTitle: 3-d structure of myosin-v inhibited state
|
Resolution | 24.00 Å |
|
 |
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | T | V | N | G | L | K | I | Q | A | Q | Y | Q | N | E | E | I | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | V | H | K | P | L | L | H | M | L | A | A | L | Q | T | V | N | P | Q | R | R | T | V | V | F | L | C | A | P | P | G | T | G | K | S | T | L | T | T | F | W | E | Y | L | A | Q | Q | D | P | E |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|   |
|
|
|
|
|
|
|
|
|   |   |
|   |   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |
|   | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|   |   |   |   |   |
|   |   |   |   |   |
Template Sequence |   |
V | A | I | N | P | Y | E | Q | L | P | I | Y | G | E | D | I | I | N | A | Y | S | G | Q | N | M | G | D | M | D | P | H | I | F | A | V | A | E | E | A | Y | K | Q | M | A | R | D | E | R | N | Q | S | . |
. |
I | I | V | S | G | E | S | G | A | G | K | T | V | S | A | K | Y | A | M | R | Y | F | A | T | V | S | G |
Template Known Secondary structure |   |
 |  |  |
|
| S | S |
|
| S |
| S | S |  |  |  |  |  |  |  | T | T |
|
| G | G | G | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  | . | . |  |  |  |  |
| S | T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  | . | . |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
108 | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | |
|
. | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . |
  |
  |   |
73 | . |
Predicted Secondary structure |   |
|
|
Query SS confidence |   |
|
|
Query Sequence |   |
L | P |
Query Conservation |   |
  |   |
Alig confidence |   |
|
|
Template Conservation |   |
  |   |
Template Sequence |   |
S | A |
Template Known Secondary structure |   |
|
|
Template Predicted Secondary structure |   |
|
|
Template SS confidence |   |
|
|
  |   |
186 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|