Job Description P11664 Confidence 98.82% Date Thu Jan 5 11:32:49 GMT 2012 Rank 61 Aligned Residues 171 % Identity 15% Template c2ccjA_ PDB info PDB header:transferase Chain: A: PDB Molecule:thymidylate kinase; PDBTitle: crystal structure of s. aureus thymidylate kinase complexed2 with thymidine monophosphate Resolution 1.7 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	V	F	L	C	A	P	P	G	T	G	K	S	T	L	T	T	F	W	E	Y	L	A	Q	Q	D	P	E	L	P	A	I	Q	T	L	P	M	D	G	F	H	H	Y	N	S	W	L	D	A	H	Q	L	R	P	F	K	G	A	P	E	T	F	D	V	A	K	L	T	E	N	L	R	Q	V	V	E	G	D	C
Query Conservation
Alig confidence																										.	.	.
Template Conservation																										.	.	.
Template Sequence		A	F	I	T	F	E	G	P	E	G	S	G	K	T	T	V	I	N	E	V	Y	H	R	L	.	.	.	V	K	D	Y	D	V	I	M	T	R	E	P	G	G	V	P	T	G	E	E	I	R	K	I	V	L	E	G	N	D	M	D	I	R	T	E	A	M	L	F	A	A	S	R	R	E	H	L	V	L	K	V	I
Template Known Secondary structure										T	T	S														.	.	.	T	T	T	S							S	S	T	T													T		S	S																					T
Template Predicted Secondary structure																										.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.				.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.							.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.
Query Sequence		T	W	P	Q	Y	D	R	Q	K	H	D	P	V	E	D	A	L	H	V	T	A	P	L	V	I	V	E	G	N	W	L	L	L	D	D	E	K	W	L	E	L	A	S	F	C	.	.	.	.	.	.	D	F	S	I	F	I	H	A	P	A	Q	I	L	R	E	R	L	I	S	R	K	I	A	G	G	L	T	R	Q
Query Conservation																																															.	.	.	.	.	.
Alig confidence						.	.	.	.	.																																					.	.	.	.	.	.																						.	.	.
Template Conservation						.	.	.	.	.																																																																.	.	.
Template Sequence		P	A	L	K	.	.	.	.	.	E	G	K	V	V	L	C	D	R	Y	I	D	S	S	L	A	Y	Q	G	Y	A	R	G	I	G	V	E	E	V	R	A	L	N	E	F	A	I	N	G	L	Y	P	D	L	T	I	Y	L	N	V	S	A	E	V	G	R	E	R	I	I	K	N	S	.	.	.	N	R	L	D	Q
Template Known Secondary structure						.	.	.	.	.	T	T							S									T	T	T	T	T	S	S														T	T				S																			T		.	.	.
Template Predicted Secondary structure						.	.	.	.	.																																																																.	.	.
Template SS confidence
		80	.	.	.						.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.				.	.	.	150	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	E	A	F	Y	A	R	T	D	G	P	N	V	E	R	V	L	M	N	S	R	Q	A	N	L	I	V	E	M	T	E	E
Query Conservation
Alig confidence																				.	.	.	.	.
Template Conservation																				.	.	.	.	.
Template Sequence		E	D	L	K	F	H	E	K	V	I	E	G	Y	Q	E	I	I	H	.	.	.	.	.	R	F	K	S	V	N	A	D	Q	P
Template Known Secondary structure																				.	.	.	.	.							T	T	S
Template Predicted Secondary structure																				.	.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.						.	.	.	.	.	.	.	180	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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