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Job DescriptionP11664
Confidence97.27%DateThu Jan 5 11:32:49 GMT 2012
Rank178Aligned Residues179
% Identity13%Templatec1hqcB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:ruvb; PDBTitle: structure of ruvb from thermus thermophilus hb8
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30.........40.........50.........60.........70.........80.........90.........100..
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Query Sequence  NVHKPLLHMLAALQTVNPQRRTVVFLCAPPGTGKSTLTTFWEYLAQQDPELPAIQTLPMDGFHHYNSWLDAHQLRPFKGA
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Template Sequence  ERLKQKLRVYLEAAKARKEPLEHLLLFGPPGLGKTTLAHVIAHELGVNLRVTSGPAIEKPGDLAAILANSLEEGDILFID
Template Known Secondary structure  SS
S






TT

T


TTT

STT

TT
T
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   18.20.........30.........40.........50.........60.........70.........80.........90.......
 
   103......110.........120.........130.........140.........150.........160.........170.........180..
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Query Sequence  PETFDVAKLTENLRQVVEGDCTWPQYDRQKHDPVEDALHVTAPLVIVEGNWLLLDDEKWLELASFCDFSIFIHAPAQILR
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Template Sequence  EIHRLSRQAEEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTLIGATTRPGLITAP. . . . LLSRFGIVEHLEYYTPEEL
Template Known Secondary structure  TTTS

S

BSSSSS
B





SS
SS
S
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   98.100.........110.........120.........130.........140.........150.... .....160.........170...
 
   183......190.. .......200.....
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Query Sequence  ERLISRKIAG. . . GLTRQVAEAFYAR
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Template Conservation     
               
  
   
Template Sequence  AQGVMRDARLLGVRITEEAALEIGRR
Template Known Secondary structure  TTS

B
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   174.....180.........190.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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