 |
Job Description | P13445 | Confidence | 72.25% | Date | Thu Jan 5 11:33:34 GMT 2012 |
Rank | 352 | Aligned Residues | 52 |
% Identity | 25% | Template | d1uhsa_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| Homeodomain-like
| Homeodomain
|
Resolution | UNK |
|
  |   |
265 | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | |
|
. | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | L | N | A | K | Q | R | E | V | L | A | R | R | F | G | L | L | G | . |
. |
Y | E | A | A | T | L | E | D | V | G | R | E | I | G | L | T | R | E | R | V | R | Q | I | Q | V | E | G | L | R | R | L | R | E | I |
Query Conservation |   |
  |
|   |   |
|
|
|   |
|
|   |   |
|
|
|
|   |   | . | . |   |   |   |   |
|
|   |
|
|
|   |   |
|
|
|
|   |   |   |
|
|
|
|   |   |   |
|
|   |
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |
|
|   |   |   |   |
|   |   |
|
|   |   |
|
|
|   |   |   |   |
|   |   |
|
|
|
|
|
|   |
|   |
|
|   |
Template Sequence |   |
T | M | T | E | D | Q | V | E | I | L | E | Y | N | F | N | K | V | N | K | H | P | D | P | T | T | L | C | L | I | A | A | E | A | G | L | T | E | E | Q | T | Q | K | W | F | K | Q | R | L | A | E | W | R | R | S |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | S | S |
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|