Return to main results Retrieve Phyre Job Id

Job DescriptionP13445
Confidence64.73%DateThu Jan 5 11:33:34 GMT 2012
Rank388Aligned Residues67
% Identity9%Templated1p4xa2
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   245....250.........260..... ....270.........280.........290.........300.........310..
Predicted Secondary structure 
...












Query SS confidence 




















. . .














































Query Sequence  GPEDTTQDDDMKQSIVKWLFE. . . LNAKQREVLARRFGLLGYEAATLEDVGREIGLTRERVRQIQVEGLRR
Query Conservation                
   
  ...
  


 

  



      

 


  



   



   

 
Alig confidence 




















...










.


































Template Conservation     
   
          
     

  
  

  .
       

  


  
 
    

  
  

  
Template Sequence  DSKEFLNLMMYTMYFKNIIKKHLTLSFVEFTILAI. ITSQNKNIVLLKDLIETIHHKYPQTVRALNNLKKQ
Template Known Secondary structure  S
SS
.TTTT

SSS
Template Predicted Secondary structure 



.









Template SS confidence 






































































   132.......140.........150.........160...... ...170.........180.........190.........200.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions