Job Description P13445 Confidence 99.32% Date Thu Jan 5 11:33:34 GMT 2012 Rank 21 Aligned Residues 90 % Identity 18% Template d1or7a2 SCOP info Sigma2 domain of RNA polymerase sigma factors Sigma2 domain of RNA polymerase sigma factors Sigma2 domain of RNA polymerase sigma factors Resolution 2.00

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		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	V	Y	F	A	R	R	A	L	R	G	D	V	A	S	R	R	R	M	I	E	S	N	L	R	L	V	V	K	I	A	R	R	Y	G	N	R	G	L	A	L	L	D	L	I	E	E	G	N	L	G	L	I	R	A	V	E	K	F	D	P	E	R	G	F	R	F	S	T	Y	A	T	W	W	I	R	Q	T	I
Query Conservation
Alig confidence																																								.																										.	.
Template Conservation																																								.																										.	.
Template Sequence		T	D	Q	V	L	V	E	R	V	Q	K	G	D	Q	K	A	F	N	L	L	V	V	R	Y	Q	H	K	V	A	S	L	V	S	R	Y	V	P	S	.	G	D	V	P	D	V	V	Q	E	A	F	I	K	A	Y	R	A	L	D	S	F	R	G	D	S	.	.	A	F	Y	T	W	L	Y	R	I	A	V	N	T	A
Template Known Secondary structure												T	T																					T	T	T	S		G	.	G	G																G	G	G			S	S	S	.	.
Template Predicted Secondary structure																																								.																										.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	A	I	M	N	Q	T	R	T	I	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	N	Y	L	V	A	Q	G	R	R	P	P	S
Template Known Secondary structure									T	T			T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions