Return to main results Retrieve Phyre Job Id

Job DescriptionP13445
Confidence85.48%DateThu Jan 5 11:33:34 GMT 2012
Rank181Aligned Residues51
% Identity12%Templated1octc1
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like Homeodomain
Resolution3.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   266...270.........280...... ...290.........300.........310......
Predicted Secondary structure 








.



Query SS confidence 




















.





























Query Sequence  LNAKQREVLARRFGLLGYEAA. TLEDVGREIGLTRERVRQIQVEGLRRLREI
Query Conservation 
  


 

  



      .

 


  



   



   

 


  
Alig confidence 




















.





























Template Conservation   
  
   

  
     
       

  
 
   

  

 


 
 

 
Template Sequence  IETNIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI
Template Known Secondary structure 


SS

T
S
Template Predicted Secondary structure 












Template SS confidence 



















































   108.110.........120.........130.........140.........150.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions