Return to main results Retrieve Phyre Job Id

Job DescriptionP13445
Confidence51.91%DateThu Jan 5 11:33:34 GMT 2012
Rank456Aligned Residues39
% Identity13%Templated1ixca1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain LysR-like transcriptional regulators
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   275....280.........290.........300.........310.......
Predicted Secondary structure 










Query SS confidence 










































Query Sequence  ARRFGLLGYEAATLEDVGREIGLTRERVRQIQVEGLRRLREIL
Query Conservation    



      

 


  



   



   

 


  
Alig confidence 



























....










Template Conservation   
  
  
   

 
 

  
 





....
  
  

  
Template Sequence  QLKYFIAVAEAGNXAAAAKRLHVSQPPI. . . . TRQXQALEADL
Template Known Secondary structure  SST

....
Template Predicted Secondary structure 




....
Template SS confidence 










































   5....10.........20.........30.. .......40...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions