Return to main results Retrieve Phyre Job Id

Job DescriptionP13445
Confidence62.61%DateThu Jan 5 11:33:34 GMT 2012
Rank398Aligned Residues39
% Identity15%Templated1d5ya1
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like AraC type transcriptional activator
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   268.270.........280.........290.........300.........310
Predicted Secondary structure 










Query SS confidence 










































Query Sequence  AKQREVLARRFGLLGYEAATLEDVGREIGLTRERVRQIQVEGL
Query Conservation   


 

  



      

 


  



   



   

Alig confidence 










....



























Template Conservation       

    ....   
 
  

     
   
 
 

   
Template Sequence  RDLLIWLEGHL. . . . DQPLSLDNVAAKAGYSKWHLQRMFKDVT
Template Known Secondary structure  TTS....SSS


TTTSS
Template Predicted Secondary structure 
....







Template SS confidence 










































   8.10........ .20.........30.........40......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions