Return to main results Retrieve Phyre Job Id

Job DescriptionP13445
Confidence82.79%DateThu Jan 5 11:33:34 GMT 2012
Rank217Aligned Residues47
% Identity21%Templated1akha_
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like Homeodomain
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   266...270.........280..... ....290.........300.........310..
Predicted Secondary structure 







.




Query SS confidence 



















.


























Query Sequence  LNAKQREVLARRFGLLGYEA. ATLEDVGREIGLTRERVRQIQVEGLRR
Query Conservation 
  


 

  



     . 

 


  



   



   

 
Alig confidence 



















.


























Template Conservation 

 

   

  
     
       

    
    
  

 




Template Sequence  ISPQARAFLEEVFRRKQSLNSKEKEEVAKKCGITPLQVRVWFINKRMR
Template Known Secondary structure 


SS

TS
Template Predicted Secondary structure 











Template SS confidence 















































   77..80.........90.........100.........110.........120....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions