Job Description P13445 Confidence 99.63% Date Thu Jan 5 11:33:34 GMT 2012 Rank 14 Aligned Residues 76 % Identity 34% Template c3t72o_ PDB info PDB header:transcription/dna Chain: O: PDB Molecule:pho box dna (strand 1); PDBTitle: phob(e)-sigma70(4)-(rnap-betha-flap-tip-helix)-dna transcription2 activation sub-complex Resolution 4.33 Å

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		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	T	Q	D	D	D	M	K	Q	S	I	V	K	W	L	F	E	L	N	A	K	Q	R	E	V	L	A	R	R	F	G	L	L	G	Y	E	A	A	T	L	E	D	V	G	R	E	I	G	L	T	R	E	R	V	R	Q	I	Q	V	E	G	L	R	R	L	R	E	I	L	Q	T	Q	G	L	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	S	A	T	T	E	S	L	R	A	A	T	H	D	V	L	A	G	L	T	A	R	E	A	K	V	L	R	M	R	F	G	I	D	M	N	T	D	Y	T	L	E	E	V	G	K	Q	F	D	V	T	R	E	R	I	R	Q	I	E	A	K	A	L	R	K	L	R	H	P	S	R	S	E	V	L	R
Template Known Secondary structure																				S								T	T	T	T	T	S	S	S	S		S												S	S																		S	S
Template Predicted Secondary structure
Template SS confidence
		533	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions