Return to main results Retrieve Phyre Job Id

Job DescriptionP13445
Confidence97.89%DateThu Jan 5 11:33:34 GMT 2012
Rank38Aligned Residues43
% Identity23%Templatec3sztB_
PDB info PDB header:transcriptionChain: B: PDB Molecule:quorum-sensing control repressor; PDBTitle: quorum sensing control repressor, qscr, bound to n-3-oxo-dodecanoyl-l-2 homoserine lactone
Resolution2.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   266...270.........280.........290.........300.........310...
Predicted Secondary structure 












Query SS confidence 















































Query Sequence  LNAKQREVLARRFGLLGYEAATLEDVGREIGLTRERVRQIQVEGLRRL
Query Conservation 
  


 

  



      

 


  



   



   

 

Alig confidence 











.....






























Template Conservation 

 

 


 
 .....
 
 
  


  
 

  

  
   
  

Template Sequence  LTARETEMLKWT. . . . . AVGKTYGEIGLILSIDQRTVKFHIVNAMRKL
Template Known Secondary structure 

.....TT

T

T
Template Predicted Secondary structure 

.....






Template SS confidence 















































   176...180....... ..190.........200.........210........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions