Return to main results Retrieve Phyre Job Id

Job DescriptionP13445
Confidence93.33%DateThu Jan 5 11:33:34 GMT 2012
Rank69Aligned Residues55
% Identity9%Templatec3r0aB_
PDB info PDB header:transcription regulatorChain: B: PDB Molecule:putative transcriptional regulator; PDBTitle: possible transcriptional regulator from methanosarcina mazei go1 (gi2 21227196)
Resolution2.31 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   257..260.........270.........280.........290.........300.........310..
Predicted Secondary structure 












Query SS confidence 























































Query Sequence  QSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRERVRQIQVEGLRR
Query Conservation    
   
  
  


 

  



      

 


  



   



   

 
Alig confidence 





















.
































Template Conservation 
  
    


  
  

  
 .      

  


  
  
   


 
  
   
Template Sequence  EDVIKCALNLTKADLNVXKSFL. NEPDRWIDTDALSKSLKLDVSTVQRSVKKLHEK
Template Known Secondary structure  T

.STT

B
TT

T
Template Predicted Secondary structure 


.









Template SS confidence 























































   12.......20.........30... ......40.........50.........60......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions