 |
Job Description | P13445 | Confidence | 77.32% | Date | Thu Jan 5 11:33:34 GMT 2012 |
Rank | 294 | Aligned Residues | 39 |
% Identity | 15% | Template | c2k27A_ |
PDB info |
PDB header:transcription regulator | Chain: A: PDB Molecule:paired box protein pax-8; |
PDBTitle: solution structure of human pax8 paired box domain
|
Resolution | UNK |
|
  |   |
266 | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | N | A | K | Q | R | E | V | L | A | R | R | F | G | L | L | G | Y | E | A | A | T | L | E | D | V | G | R | E | I | G | L | T | R | E | R | V | R | Q | I | Q | V | E |
Query Conservation |   |
|   |   |
|
|
|   |
|
|   |   |
|
|
|
|   |   |   |   |   |   |
|
|   |
|
|
|   |   |
|
|
|
|   |   |   |
|
|
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |
|   |
|
|
|
|
|   | . | . | . | . |   |   |
|   |
|   |   |
|
|
|
|   |
|   |
|
|   |
|   |
|
|
|
|
|   |
|
Template Sequence |   |
L | P | E | V | V | R | Q | R | I | V | D | L | A | . |
. |
. |
. |
H | Q | G | V | R | P | C | D | I | S | R | Q | L | R | V | S | H | G | C | V | S | K | I | L | G | R |
Template Known Secondary structure |   |
S |
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  | T |
|
|  |  |  |  |  |  |  |  | T |
|
| S |  |  |  |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
26 | . | . | . | 30 | . | . | . | . | . | . | . | . | |
|
|
|
. | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|