Return to main results Retrieve Phyre Job Id

Job DescriptionP13445
Confidence88.98%DateThu Jan 5 11:33:34 GMT 2012
Rank140Aligned Residues45
% Identity4%Templatec2ebyA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:putative hth-type transcriptional regulator ybaq; PDBTitle: crystal structure of a hypothetical protein from e. coli
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   284.....290.........300.........310. ........320........
Predicted Secondary structure 






....



Query SS confidence 



























. . . .
















Query Sequence  EAATLEDVGREIGLTRERVRQIQVEGLR. . . . RLREILQTQGLNIEALF
Query Conservation     

 


  



   



   

 ....


  
       
 
 
Alig confidence 



























....
















Template Conservation   



 


   


   

  
 
   

   
 


  
 

   

Template Sequence  LDLKINELAELLHVHRNSVSALINNNRKLTTEMAFRLAKVFDTTVDFWL
Template Known Secondary structure  TT

TS
TTSS


T

Template Predicted Secondary structure 














Template SS confidence 
















































   30.........40.........50.........60.........70........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions