Return to main results Retrieve Phyre Job Id

Job DescriptionP42599
Confidence95.89%DateThu Jan 5 12:01:45 GMT 2012
Rank432Aligned Residues71
% Identity8%Templated5ldha1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains LDH N-terminal domain-like
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40...... ...50.........60.........70....
Predicted Secondary structure 










........













Query SS confidence 











































. . . . . . . .



























Query Sequence  RFAVIGTNWITRQFVEAAHESGKYKLTAVYSRSLEQAQHFANDF. . . . . . . . SVEHLFTSLEAMAESDAIDAVYIASPNS
Query Conservation 





 
         
       
 

 
     
   
   ........          


     
 
 
 

  
Alig confidence 











































........













..











Template Conservation 







 

   
  

      

 
 

          

                    
 ..







    
Template Sequence  KITVVGVGQVGMACAISILGKSLTDELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVANKDYSVTA. . NSKIVVVTAGVR
Template Known Secondary structure 
S

SS

SS

S
SGGGS





SSSSGGG..S
S

TT
Template Predicted Secondary structure 

















..






Template SS confidence 















































































   23......30.........40.........50.........60.........70.........80........ .90.........100
 
   75
Predicted Secondary structure 
Query SS confidence 
Query Sequence  L
Query Conservation   
Alig confidence 
Template Conservation   
Template Sequence  Q
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   102
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions