 |
Job Description | P42599 | Confidence | 96.99% | Date | Thu Jan 5 12:01:45 GMT 2012 |
Rank | 303 | Aligned Residues | 98 |
% Identity | 16% | Template | d2g0ta1 |
SCOP info | P-loop containing nucleoside triphosphate hydrolases
| P-loop containing nucleoside triphosphate hydrolases
| Nitrogenase iron protein-like
|
Resolution | 2.67 |
|
 |
  |   |
13 | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . |
|
|
|  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
| . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | R | Q | F | V | E | A | A | H | E | S | G | K | Y | K | L | T | A | V | Y | S | R | S | L | E | Q | A | Q | H | F | A | N | D | F | . |
. |
. |
. |
. |
S | V | E | H | L | F | T | S | L | E | A | M | A | E | S | D | A | I | D | A | V | Y | I | A | S | P | . |
. |
. |
. |
. |
. |
N | S | L | H | F | S | Q | T | Q |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |
|
|   |
|   |   |   |   |   |
|   |   |   |
|   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |
|   |
|   |
|   |
|
| . | . | . | . | . | . |   |   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |
|
|
|
|
|   |   |   |   |   |
|
|   |
|
|
|   |   | . | . |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|
| . |
|   |   |
|   |   |   |
|   |   |   | . |   |
|   |   |
|
|
|
|
|
|
|   |
|
|   |
|
|   |   |
|   |   |   |
|   |
Template Sequence |   |
A | K | T | T | Y | G | L | L | R | H | S | R | L | F | K | P | V | C | V | V | A | E | H | . |
. |
E | G | K | X | A | S | D | F | V | K | P | V | R | Y | D | V | P | . |
V | V | S | S | V | E | K | A | K | E | X | . |
G | A | E | V | L | I | I | G | V | S | N | P | G | G | Y | L | E | E | Q | I | A | T | L | V | K |
Template Known Secondary structure |   |
G |  |  |  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  | S | S |
| . | . | T | T |
| B | G | G | G | T |
|
| . |
|
| S |
|
| B | . |  |  | S | S |  |  |  |  |  |  | T | . | T |
|
|  |  |  |  |
|
|
| S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
| . | . |
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
| . |  |  |
|
|  |  |  |  |  |
|
| . |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
26 | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | |
|
. | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | |
. | . | . | . | 70 | . | . | . | . | . | . | |
. | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . |
  |
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | F | L | S | H | K | I | N | V | I | C | E | K | P | L | A | S | N | L | A | E | V | D | A | A | I | A | C | A | R | E | N | Q | V | V | L | F |
Query Conservation |   |
  |
|
|   |   |
|
|   |
|
|   |
|
|
|
|
|   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|
|   |
|
|
| . | . | . | . |
|
|
|
|   |
|   |
|   |   |   |   |   |
|   |   |   |
|   |   |
|   |
Template Sequence |   |
K | A | L | S | L | G | X | D | V | I | S | . |
. |
. |
. |
G | L | H | F | S | Q | Q | T | E | F | L | K | I | A | H | E | N | G | T | R | I | I |
Template Known Secondary structure |   |
 |  |  |  | T | T |
|  |  |  |  | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|  |  |  |  |
| . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
102 | . | . | . | . | . | . | . | 110 | . | . | |
|
|
|
. | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|