Job Description P42599 Confidence 97.17% Date Thu Jan 5 12:01:45 GMT 2012 Rank 273 Aligned Residues 81 % Identity 11% Template c8ldhA_ PDB info PDB header:oxidoreductase(choh(d)-nad(a)) Chain: A: PDB Molecule:m4 apo-lactate dehydrogenase; PDBTitle: refined crystal structure of dogfish m4 apo-lactate2 dehydrogenase Resolution 2.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.										.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.																										.
Query SS confidence																																															.	.	.	.	.	.	.	.	.																										.
Query Sequence		I	R	F	A	V	I	G	T	N	W	I	T	R	Q	F	V	E	A	A	H	E	S	G	K	Y	K	L	T	A	V	Y	S	R	S	L	E	Q	A	Q	H	F	A	N	D	F	.	.	.	.	.	.	.	.	.	S	V	E	H	L	F	T	S	L	E	A	M	A	E	S	D	A	I	D	A	V	Y	I	A	S	.
Query Conservation																																															.	.	.	.	.	.	.	.	.																										.
Alig confidence																																															.	.	.	.	.	.	.	.	.													.	.	.											.
Template Conservation																																																																				.	.	.
Template Sequence		N	K	I	T	V	V	G	V	G	A	V	G	M	A	C	A	I	S	I	L	M	K	D	L	A	D	E	V	A	L	V	D	V	M	E	D	K	L	K	G	E	M	M	D	L	Q	H	G	S	L	F	L	H	T	A	K	I	V	S	G	K	D	Y	S	V	S	.	.	.	A	G	S	K	L	V	V	I	T	A	G
Template Known Secondary structure		S								S												T	T	T			S							S															T	G	G	G										S	S	G	G	G	G	.	.	.	T	T		S
Template Predicted Secondary structure																																																																				.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.				.	.	.	90	.	.	.	.	.	.	.
						72	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	P	N	S	L	H	F	S	Q	T	Q	L	F	L	S
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		A	R	Q	Q	E	G	E	S	R	L	N	L	V	Q	R	N	V	N
Template Known Secondary structure						T	T
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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