Job Description P42599 Confidence 96.73% Date Thu Jan 5 12:01:45 GMT 2012 Rank 348 Aligned Residues 121 % Identity 13% Template c3u62A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase from thermotoga maritima Resolution 1.45 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.				.
Predicted Secondary structure																																																																														.	.	.
Query SS confidence																																																																														.	.	.
Query Sequence		R	F	A	V	I	G	T	N	W	I	T	R	Q	F	V	E	A	A	H	E	S	G	K	Y	K	L	T	A	V	Y	S	R	S	L	E	Q	A	Q	H	F	A	N	D	F	S	V	E	H	L	F	T	S	L	E	A	M	A	E	S	D	A	I	D	A	V	Y	I	A	S	P	N	S	L	H	F	S	.	.	.	Q
Query Conservation																																																																														.	.	.
Alig confidence																													.																				.											.	.																	.	.	.
Template Conservation																													.																				.											.	.
Template Sequence		P	V	V	V	V	G	A	G	G	A	A	R	A	V	I	Y	A	L	L	Q	M	G	V	K	D	I	W	.	V	V	N	R	T	I	E	R	A	K	A	L	D	F	P	V	K	I	F	.	S	L	D	Q	L	D	E	V	V	K	.	.	K	A	K	S	L	F	N	T	T	S	V	G	M	K	G	E	E	L	P	V
Template Known Secondary structure		S							S													T	T						.				S							T			S	S					.		G	G	G							.	.	T		S						S	S	T	T	T	T	S				S
Template Predicted Secondary structure																													.																				.											.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		T	Q	L	F	L	S	H	K	I	N	V	I	C	E	K	P	L	A	S	N	L	A	E	V	D	A	A	I	A	C	A	R	E	N	Q	V	.	V	L	F	E	A	F	K	T	A	C	L	P	N	F	H	L	L	R
Query Conservation																																						.
Alig confidence															.	.	.						.	.	.													.
Template Conservation															.	.	.						.	.	.
Template Sequence		S	D	D	S	L	K	N	L	S	L	V	Y	D	.	.	.	V	I	Y	F	D	.	.	.	T	P	L	V	V	K	A	R	K	L	G	V	K	H	I	I	K	G	N	L	M	F	Y	Y	Q	A	M	E	N	L	K
Template Known Secondary structure							T	T		S					.	.	.		S	S	S		.	.	.											T		S					T
Template Predicted Secondary structure															.	.	.						.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.				.	200	.	.	.				.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions