 |
| Job Description | P42599 | | Confidence | 96.44% | Date | Thu Jan 5 12:01:45 GMT 2012 |
| Rank | 389 | Aligned Residues | 68 |
| % Identity | 18% | Template | c3q0iA_ |
| PDB info |
PDB header:transferase | Chain: A: PDB Molecule:methionyl-trna formyltransferase; |
PDBTitle: methionyl-trna formyltransferase from vibrio cholerae
|
| Resolution | 1.89 Å |
|
| | |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | |
|
. | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . |
| Predicted Secondary structure | |
|  | | | |  |
|
|
|  | | | | | | | | | | | |
|
|
|
| | | | | | |
| . | . |
|
| | | | | | | | | | |
|
|
|
| | | | . | . | . | . | . | . | . |
|
| | | | | |
|
|
|
|
|
| | | | | |
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
I | R | F | A | V | I | G | T | N | W | I | T | R | Q | F | V | E | A | A | H | E | S | G | K | Y | K | L | T | A | V | Y | S | . |
. |
R | S | L | E | Q | A | Q | H | F | A | N | D | F | S | V | E | H | L | F | . |
. |
. |
. |
. |
. |
. |
T | S | L | E | A | M | A | E | S | D | A | I | D | A | V | Y | I | A | S |
| Query Conservation | |
|
|
|
|
|
|
| |
| | | | | | | | | |
| | | | | | | |
| |
|
| |
| . | . | | | | | |
| | | |
| | | | | | | | | | . | . | . | . | . | . | . | | | | |
|
|
| | | | | |
| |
| |
| |
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
|
| |
| |
| | | | |
| | | |
| | |
| | | | . | | |
|
| | |
| |
| | | | | | | | | | | |
| | | | |
|
| . | | | | | | | | | | | | | | | |
| | | | | |
|
| |
| | | |
| Template Sequence | |
L | R | I | V | F | A | G | T | P | D | F | A | A | R | H | L | A | A | L | L | S | S | . |
E | H | E | I | I | A | V | Y | T | Q | P | E | T | A | S | P | V | K | T | L | A | L | E | H | N | V | P | . |
V | Y | Q | P | E | N | F | K | S | D | E | S | K | Q | Q | L | A | A | L | N | A | D | L | X | V | V | V | A |
| Template Known Secondary structure | |
| | | | | |
|
| S | | | | | | | | | | | | T | S | . | S | S | | | | | | |
|
|
|
|
|
|
| | | | | | | | | T | T |
|
| . | | |
|
| S |
| S |
| S | | | | | | | | | T | T |
|
| S | | | | | S | S |
| Template Predicted Secondary structure | |
| | | | | |
|
|
| | | | | | | | | | | | |
| . |
|
|
| | | | | |
|
|
|
|
|
|
| | | | | | | | |
|
|
|
| . | | | |
|
|
|
|
|
| | | | | | | | | |
|
|
|
| | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | |
. | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | |
. | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
