Job Description P42599 Confidence 100.00% Date Thu Jan 5 12:01:45 GMT 2012 Rank 6 Aligned Residues 316 % Identity 16% Template c3oqbF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:oxidoreductase; PDBTitle: crystal structure of putative oxidoreductase from bradyrhizobium2 japonicum usda 110 Resolution 2.60 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.									.	.	20	.	.	.	.	.	.	.	.	.	30										.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Query Sequence		I	R	F	A	V	I	G	T	N	W	I	T	R	Q	F	V	.	.	.	.	.	.	.	.	E	A	A	H	E	S	G	K	Y	K	L	T	A	.	.	.	.	.	.	.	.	.	V	Y	S	R	S	L	E	Q	A	Q	H	F	A	N	D	F	S	V	E	H	L	F	T	S	L	E	A	M	A	E	S	D	A	I
Query Conservation																		.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	R	L	G	L	I	X	N	G	V	T	G	R	X	G	L	N	Q	H	L	I	R	S	I	V	A	I	R	D	Q	G	G	V	R	L	K	N	G	D	R	I	X	P	D	P	I	L	V	G	R	S	A	E	K	V	E	A	L	A	K	R	F	N	I	A	R	W	T	T	D	L	D	A	A	L	A	D	K	N	D
Template Known Secondary structure										S	T	T	S						T	T	T	T	T	T								T	S				T	T	S												S													T						S									T	T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.
Predicted Secondary structure																																																																												.	.
Query SS confidence																																																																												.	.
Query Sequence		D	A	V	Y	I	A	S	P	N	S	L	H	F	S	Q	T	Q	L	F	L	S	H	K	I	N	V	I	C	E	K	P	L	A	S	N	L	A	E	V	D	A	A	I	A	C	A	R	E	N	Q	V	V	L	F	E	A	F	K	T	A	C	L	P	N	F	H	L	L	R	Q	A	L	P	K	.	.	V	G	K	L
Query Conservation																																																																												.	.
Alig confidence																																																																												.	.
Template Conservation
Template Sequence		T	X	F	F	D	A	A	T	T	Q	A	R	P	G	L	L	T	Q	A	I	N	A	G	K	H	V	Y	C	E	K	P	I	A	T	N	F	E	E	A	L	E	V	V	K	L	A	N	S	K	G	V	K	H	G	T	V	Q	D	K	L	F	L	P	G	L	K	K	I	A	F	L	R	D	S	G	F	F	G	R	I
Template Known Secondary structure								S		T	T	T										T	T	T							S		S		S	S															T								G	G	G	G	S												T	T	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.													.	.	.	.	.	.	.	210
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	K	V	F	F	N	Y	C	Q	Y	S	S	R	Y	Q	R	Y	L	D	G	E	N	P	N	T	F	N	P	A	F	S	N	G	S	I	M	D	I	G	F	Y	C	L	A	S	A	V	A	L	F	G	E	P	K	S	V	Q	A	T	A	.	.	.	.	.	.	.	.	.	.	.	.	S	L	L	A	S	G	V	D
Query Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	S	V	R	G	E	F	G	Y	W	V	F	E	G	G	W	Q	E	A	Q	R	P	S	W	N	Y	R	D	E	D	G	G	G	I	I	L	D	X	V	C	H	W	R	Y	V	L	D	N	L	F	G	N	V	Q	S	V	V	C	I	G	N	T	D	I	P	E	R	F	D	E	Q	G	K	K	Y	K	A	T	A	D
Template Known Secondary structure															S	S	S	S			S	S		G	G	G	G		G	G	G	T																			T															S					T	T	S							S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.						.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.														.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure																								.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	Q	G	V	V	V	M	D	Y	G	D	F	S	V	T	L	Q	H	S	K	V	S	.	.	.	.	.	D	S	V	L	A	S	E	I	Q	G	E	A	G	S	L	V	I	E	K	L	S	E	.	.	.	.	.	.	.	.	.	.	.	.	.	C	Q	K	V	C	F	V	P	R	G	S	Q	M	Q	D	L	T	Q
Query Conservation																								.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	S	A	Y	A	T	F	Q	L	E	G	G	V	I	A	H	I	N	X	S	W	V	T	R	V	Y	R	D	D	L	V	T	F	Q	V	D	G	T	H	G	S	A	V	A	G	L	S	D	C	X	I	Q	A	R	Q	A	T	P	R	P	V	W	N	P	K	R	L	H	D	F	Y	G	D	W	Q	K	L	P	D	N
Template Known Secondary structure											T	T	T									S	S					S	S	S	S								S	S							S	S							G	G	G														G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	H	I	N	T	M	L	Y	E	A	E	L	F	A	T	L	V	D	E	H	L	V	D	H	P	G	L	A	V	S	R	I	T	A	K	L	L	T	E	I	R	R	Q	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	S	Y	D	N	G	F	K	E	Q	W	E	X	F	I	R	H	V	Y	E	D	A	P	Y	K	F	T	L	L	E	G	A	K	G	V	Q	L	A	E	C	A	L	K	S	W
Template Known Secondary structure		S																										S
Template Predicted Secondary structure
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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