Job Description P42599 Confidence 100.00% Date Thu Jan 5 12:01:45 GMT 2012 Rank 25 Aligned Residues 305 % Identity 17% Template c3m2tA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:probable dehydrogenase; PDBTitle: the crystal structure of dehydrogenase from chromobacterium2 violaceum Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		M	I	R	F	A	V	I	G	T	N	W	I	T	R	Q	F	.	V	E	A	A	H	E	S	G	K	Y	K	L	T	A	V	Y	S	R	S	L	E	Q	A	Q	H	F	A	N	D	F	S	V	E	H	L	F	T	S	L	E	A	M	A	E	S	D	A	I	D	A	V	Y	I	A	S	P	N	S	L	H	F	S	Q
Query Conservation																		.
Alig confidence																		.
Template Conservation
Template Sequence		L	I	K	V	G	L	V	G	I	G	A	Q	X	Q	E	N	L	L	P	S	L	L	Q	X	Q	D	I	R	I	V	A	A	C	D	S	D	L	E	R	A	R	R	V	H	R	F	I	S	D	I	P	V	L	D	N	V	P	A	X	L	N	Q	V	P	L	D	A	V	V	X	A	G	P	P	Q	L	H	F	E	X
Template Known Secondary structure											S						T							T		T	T									S	S					G	G	G	G	G	T	S		S					S	S								S			S						S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	L	F	L	S	H	K	I	N	V	I	C	E	K	P	L	A	S	N	L	A	E	V	D	A	A	I	A	C	A	R	E	N	Q	V	V	L	F	E	A	F	K	T	A	C	L	P	N	F	H	L	L	R	Q	A	L	P	K	V	G	K	L	R	K	V	F	F	N	Y	C	Q	Y	S	S	R	Y	Q	R	Y
Query Conservation
Alig confidence																																																																													.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		G	L	L	A	X	S	K	G	V	N	V	F	V	E	K	P	P	C	A	T	L	E	E	L	E	T	L	I	D	A	A	R	R	S	D	V	V	S	G	V	G	X	N	F	K	F	A	R	P	V	R	Q	L	R	E	X	T	Q	V	D	E	F	G	E	T	L	H	I	Q	L	N	H	Y	A	N	.	.	.	.	.
Template Known Secondary structure								T	T							S		S		S	S															T																							T	S	G	G	G														.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																				.																																											.	.	.
Query SS confidence																																				.																																											.	.	.
Query Sequence		L	D	G	E	N	P	N	T	F	N	P	A	F	S	N	G	S	I	M	D	I	G	F	Y	C	L	A	S	A	V	A	L	F	G	.	E	P	K	S	V	Q	A	T	A	S	L	L	A	S	G	V	D	A	Q	G	V	V	V	M	D	Y	G	D	F	S	V	T	L	Q	H	S	K	V	S	D	S	V	.	.	.
Query Conservation																																				.																																											.	.	.
Alig confidence		.																																		.															.	.																											.	.	.
Template Conservation		.																																																	.	.
Template Sequence		.	K	P	R	A	P	L	W	G	L	D	S	T	L	R	S	F	L	L	A	Q	A	I	H	T	I	D	L	A	I	T	F	G	D	G	E	L	R	R	V	Q	S	S	V	Q	R	H	D	D	.	.	A	L	I	V	R	A	D	X	A	F	S	S	G	A	T	A	S	L	L	A	G	T	S	F	P	Y	F	E	F
Template Known Secondary structure		.			S	S			T	T		S										T														S													T	T	.	.											T	T	S									S		S	S	S
Template Predicted Secondary structure		.																																																	.	.
Template SS confidence
			158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.																.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	S	E	I	Q	G	E	A	G	S	L	V	I	E	K	L	S	E	C	Q	K	V	C	F	V	P	R	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	M	Q	D	L	T	Q	P	Q	H	I	N	T	M	L	Y	E	A	E	L	F	A	T	L	V	D	E	H	L	V	D	H	P	G	L
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.
Template Sequence		D	X	K	L	V	S	S	S	S	T	L	V	E	L	D	N	L	W	.	.	.	N	I	T	L	H	E	P	E	H	A	T	R	P	T	G	A	A	K	R	W	R	G	A	W	Q	P	G	P	L	D	S	G	Y	E	R	S	G	Y	H	G	E	L	H	Q	F	F	Q	A	I	R	E	H	R	R	F	E	A	D	F
Template Known Secondary structure								T	T	S							T	T	T	.	.	.							T	T			B	T	T	T	B	S		T	T									T	T			S	S	T	T	T	S														T	T				T	T	S	T
Template Predicted Secondary structure																				.	.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.				.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	S	R	I	T	A	K	L	L	T	E	I	R	R	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	L	L	P	T	Y	R	V	I	E	E	I	C	S	A
Template Known Secondary structure		G	G	G
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions