Job Description P42599 Confidence 100.00% Date Thu Jan 5 12:01:45 GMT 2012 Rank 36 Aligned Residues 302 % Identity 16% Template c3ip3D_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:oxidoreductase, putative; PDBTitle: structure of putative oxidoreductase (tm_0425) from2 thermotoga maritima Resolution 2.14 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.																						.
Query SS confidence																												.	.																						.
Query Sequence		I	R	F	A	V	I	G	T	N	W	I	T	R	Q	F	V	E	A	A	H	E	S	G	K	Y	K	.	.	L	T	A	V	Y	S	R	S	L	E	Q	A	Q	H	F	A	N	D	F	S	V	.	E	H	L	F	T	S	L	E	A	M	A	E	S	D	A	I	D	A	V	Y	I	A	S	P	N	S	L	H	F	S
Query Conservation																												.	.																						.
Alig confidence																												.	.																						.
Template Conservation
Template Sequence		L	K	I	C	V	I	G	S	S	G	H	F	R	Y	A	L	E	G	L	D	E	E	C	S	I	T	G	I	A	P	G	V	P	E	E	D	L	S	K	L	E	K	A	I	S	E	X	N	I	K	P	K	K	Y	N	N	W	W	E	X	L	E	K	E	K	P	D	I	L	V	I	N	T	V	F	S	L	N	G	K
Template Known Secondary structure									S	S	S		T					T	T			T	T									S	S	T	T												T	T	T							S												S						S	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.			.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																						.	.
Query SS confidence																																						.	.
Query Sequence		Q	T	Q	L	F	L	S	H	K	I	N	V	I	C	E	K	P	L	A	S	N	L	A	E	V	D	A	A	I	A	C	A	R	E	N	Q	.	.	V	V	L	F	E	A	F	K	T	A	C	L	P	N	F	H	L	L	R	Q	A	L	P	K	V	G	K	L	R	K	V	F	F	N	Y	C	Q	Y	S	S	R	Y
Query Conservation																																						.	.
Alig confidence																																						.	.
Template Conservation
Template Sequence		I	L	L	E	A	L	E	R	K	I	H	A	F	V	E	K	P	I	A	T	T	F	E	D	L	E	K	I	R	S	V	Y	Q	K	V	R	N	E	V	F	F	T	A	X	F	G	I	R	Y	R	P	H	F	L	T	A	K	K	L	V	S	E	G	A	V	G	E	I	R	L	V	N	T	Q	K	S	Y	K	L	G
Template Known Secondary structure									T	T							S	S	S		S	S															T	T	T								G	G	G	G	S												T	T	T	T		S										B	B
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.					.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																																							.															.	.	.	.
Query SS confidence																																							.															.	.	.	.
Query Sequence		Q	R	Y	L	D	G	E	N	P	N	T	F	N	P	A	F	S	N	G	S	I	M	D	I	G	F	Y	C	L	A	S	A	V	A	L	F	G	.	E	P	K	S	V	Q	A	T	A	S	L	L	A	S	.	.	.	.	G	V	D	A	Q	G	V	V	V	M	D	Y	G	D	F	S	V	T	L	Q	H	S	K	V
Query Conservation																																							.															.	.	.	.
Alig confidence			.	.	.	.	.																																.															.	.	.	.
Template Conservation			.	.	.	.	.
Template Sequence		Q	.	.	.	.	.	R	P	D	F	Y	K	K	R	E	T	Y	G	G	T	I	P	W	V	G	I	H	A	I	D	W	I	H	W	I	T	G	K	K	F	L	S	V	Y	A	T	H	S	R	L	H	N	S	G	H	G	E	L	E	T	T	A	L	C	H	F	T	L	E	N	E	V	F	A	S	L	S	I	D	Y
Template Known Secondary structure			.	.	.	.	.			G	G	G	G	S											T	T																									S	S		T	T		T	T			S									G	G	G									S
Template Predicted Secondary structure			.	.	.	.	.
Template SS confidence
		162						.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		232	.	.	.								.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.
Query Sequence		S	D	S	V	.	.	.	.	.	.	.	L	A	S	E	I	Q	G	E	A	G	S	L	V	I	E	K	L	S	E	C	Q	K	V	C	F	V	P	R	G	S	Q	M	Q	D	L	T	Q	P	Q	H	I	N	T	M	L	Y	E	A	E	L	F	A	T	L	V	D	E	H	L	V	D	H	P	G	L	A	V	S	R
Query Conservation						.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.																		.	.	.	.														.	.	.	.	.
Template Conservation																														.	.	.	.														.	.	.	.	.
Template Sequence		L	R	P	Q	G	A	P	T	H	D	D	D	R	X	R	I	V	G	T	R	G	I	V	E	V	I	N	E	.	.	.	.	R	V	F	L	T	D	E	K	G	H	R	E	V	.	.	.	.	.	P	L	V	E	K	G	Q	I	F	E	D	F	L	R	E	I	R	G	Q	G	K	C	X	V	T	P	E	D	S	I
Template Known Secondary structure		B			T	T	S	S	S	S	B									S	S							T	T	.	.	.	.							T	T						.	.	.	.	.																	T	T	S	S			S	S
Template Predicted Secondary structure																														.	.	.	.														.	.	.	.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.					.	.	.	.	.	270	.	.	.	.	.	.	.						.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	A	K	L	L	T	E	I	R	R	Q	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	T	E	I	A	L	K	A	R	L	S	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions