Job Description P42599 Confidence 98.40% Date Thu Jan 5 12:01:45 GMT 2012 Rank 118 Aligned Residues 146 % Identity 18% Template c3ingA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:homoserine dehydrogenase; PDBTitle: crystal structure of homoserine dehydrogenase (np_394635.1) from2 thermoplasma acidophilum at 1.95 a resolution Resolution 1.95 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.					.	.	.	.	.	.	30	.	.	.										.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.											.	.	.	.	.	.	.	.	.																	.
Query SS confidence																								.	.	.	.											.	.	.	.	.	.	.	.	.																	.
Query Sequence		I	R	F	A	V	I	G	T	N	W	I	T	R	Q	F	V	E	A	A	H	E	S	.	.	.	.	G	K	Y	K	L	T	A	V	Y	S	.	.	.	.	.	.	.	.	.	R	S	L	E	Q	A	Q	H	F	A	N	D	F	S	V	E	.	H	L	F	T	S	L	E	A	M	A	E	S	D	A	I	D	A	V
Query Conservation																								.	.	.	.											.	.	.	.	.	.	.	.	.																	.
Alig confidence																								.	.	.	.											.	.	.	.	.	.	.	.	.																	.
Template Conservation
Template Sequence		I	R	I	I	L	X	G	T	G	N	V	G	L	N	V	L	R	I	I	D	A	S	N	R	R	R	F	S	I	K	V	V	G	V	S	D	S	R	S	Y	A	S	G	R	N	L	D	I	S	S	I	I	S	N	K	E	K	T	G	R	I	S	D	R	A	F	S	G	P	E	D	L	X	G	E	A	A	D	L	L
Template Known Secondary structure										S																												S	S	B					S	S														S		S		S	S	B			S	G	G	G	G	T	T	S			S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		68	.	70	.	.	.	.	.					.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure										.	.	.	.															.																													.
Query SS confidence										.	.	.	.															.																													.
Query Sequence		Y	I	A	S	P	N	S	L	.	.	.	.	H	F	S	Q	T	Q	L	F	L	S	H	K	I	N	.	V	I	C	E	K	P	L	A	S	N	L	A	E	V	D	A	A	I	A	C	A	R	E	N	Q	V	V	L	.	F	E	A	F	K	T	A	C	L	P	N	F	H	L	L	R	Q	A	L	P	K	V	G	K
Query Conservation										.	.	.	.															.																													.
Alig confidence										.	.	.	.															.										.	.																		.																				.
Template Conservation																																						.	.																																						.
Template Sequence		V	D	C	T	P	A	S	R	D	G	V	R	E	Y	S	L	Y	R	X	A	F	E	S	G	X	N	V	V	T	A	N	K	S	G	L	A	.	.	N	K	W	H	D	I	X	D	S	A	N	Q	N	S	K	Y	I	R	Y	E	A	T	V	A	G	G	V	P	L	F	S	V	L	D	Y	S	I	.	L	P	S	K
Template Known Secondary structure									S	S	S													T	T													.	.														T						G	G	G	S	S	T	T	S									T		.	T	T
Template Predicted Secondary structure																																						.	.																																						.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.			.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.
		142	.	.	.	.	.	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	K	V	F	F	N	Y	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	R	F	R	G	I	V	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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