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Job DescriptionP42599
Confidence100.00%DateThu Jan 5 12:01:45 GMT 2012
Rank12Aligned Residues311
% Identity16%Templatec3f4lF_
PDB info PDB header:oxidoreductaseChain: F: PDB Molecule:putative oxidoreductase yhhx; PDBTitle: crystal structure of a probable oxidoreductase yhhx in2 triclinic form. northeast structural genomics target er647
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10..... ....20.........30.........40.........50.........60.........70.........
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Query Sequence  MIRFAVIGTNWITRQ. FVEAAHESGKYKLTAVYSRSLEQAQHFANDFSVEHLFTSLEAMAESDAIDAVYIASPNSLHFSQ
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Template Sequence  VINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYSHIHFTSDLDEVLNDPDVKLVVVCTHADSHFEY
Template Known Secondary structure 


STTT
TTT
SS

TTSSSGGGTT
S
T
TT
S
GGG
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   80.........90.........100.........110.........120.........130.........140.........150.........
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Query Sequence  TQLFLSHKINVICEKPLASNLAEVDAAIACARENQVVLFEAFKTACLPNFHLLRQALPKVGKLRKVFFNYCQYSSRYQRY
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Template Sequence  AKRALEAGKNVLVEKPFTPTLAQAKELFALAKSKGLTVTPYQNRRFDSCFLTAKKAIESGKLGEIVEVESHFDYY. . . . .
Template Known Secondary structure  TT

S
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SST



GGGG
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S


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   82.......90.........100.........110.........120.........130.........140.........150......
 
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Query Sequence  LDGENPNTFNPAFSNGSIMDIGFYCLASAVALFGEPKSVQATASLLAS. . GVDAQGVVVMDYGDFSVTLQHSKVSDSV. L
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Template Sequence  . . RPVAETKPGLPQDGAFYGLGVHTXDQIISLFGRPDHVAYDIRSLRNKANPDDTFEAQLFYGDLKAIVKTSHLVKIDYP
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GGGST
S
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S
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   157..160.........170.........180.........190.........200.........210.........220.........230....
 
   237..240.........250... ......260.........270.........280.........290.....
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Query Sequence  ASEIQGEAGSLVIEKLS. . . . . . . . . . . . . . . . . . . . . ECQKVCFVPRGSQMQDLTQPQHINTMLYEAELFATLVDEHLV
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Template Sequence  KFIVHGKKGSFIKYGIDQQETSLKANIXPGEPGFAADDSVGVLEYVNDEGVTVREEXKPEXGDYGRVYDALYQTITHGAP
Template Known Secondary structure  SSS
S

STT

TTSTTTT





TTS






TT


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   235....240.........250.........260.........270.........280.........290.........300.........310....
 
   296...300.........310........
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Query Sequence  DHPGLAVSRITAKLLTEIRRQTG
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Template Sequence  NYVKESEVLTNLEILERGFEQAS
Template Known Secondary structure 
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   315....320.........330.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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