Job Description P42599 Confidence 100.00% Date Thu Jan 5 12:01:45 GMT 2012 Rank 29 Aligned Residues 305 % Identity 14% Template c3ec7C_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:putative dehydrogenase; PDBTitle: crystal structure of putative dehydrogenase from salmonella2 typhimurium lt2 Resolution 2.15 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.																														.
Query SS confidence																					.																														.
Query Sequence		I	R	F	A	V	I	G	T	N	W	I	T	R	Q	F	V	E	A	A	.	H	E	S	G	K	Y	K	L	T	A	V	Y	S	R	S	L	E	Q	A	Q	H	F	A	N	D	F	S	V	E	.	H	L	F	T	S	L	E	A	M	A	E	S	D	A	I	D	A	V	Y	I	A	S	P	N	S	L	H	F	S	Q
Query Conservation																					.																														.
Alig confidence																					.																														.
Template Conservation
Template Sequence		L	K	A	G	I	V	G	I	G	X	I	G	S	D	H	L	R	R	L	A	N	T	V	S	G	V	E	V	V	A	V	C	D	I	V	A	G	R	A	Q	A	A	L	D	K	Y	A	I	E	A	K	D	Y	N	D	Y	H	D	L	I	N	D	K	D	V	E	V	V	I	I	T	A	S	N	E	A	H	A	D	V
Template Known Secondary structure										S													T		T	T									S	S	T	T									T	T							S	S								T	T								S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		T	Q	L	F	L	S	H	K	I	N	V	I	C	E	K	P	L	A	S	N	L	A	E	V	D	A	A	I	A	C	A	R	E	N	Q	V	V	.	L	F	E	A	F	K	T	A	C	L	P	N	F	H	L	L	R	Q	A	L	P	K	V	G	K	L	R	K	V	F	F	N	Y	C	Q	Y	S	S	R	Y	Q	R
Query Conservation																																							.
Alig confidence																																							.
Template Conservation
Template Sequence		A	V	A	A	L	N	A	N	K	Y	V	F	C	E	K	P	L	A	V	T	A	A	D	C	Q	R	V	I	E	A	E	Q	K	N	G	K	R	X	V	Q	I	G	F	X	R	R	Y	D	K	G	Y	V	Q	L	K	N	I	I	D	S	G	E	I	G	Q	P	L	X	V	H	G	R	H	Y	N	A	S	T	V	P
Template Known Secondary structure								T	T							S	S	S		S	S														T	T	S								G	G	G	G	S													T	T	T		S											S				T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.					.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																																																			.	.	.	.																										.	.
Query SS confidence																																																			.	.	.	.																										.	.
Query Sequence		Y	L	D	G	E	N	P	N	T	F	N	P	A	F	S	N	G	S	I	M	D	I	G	F	Y	C	L	A	S	A	V	A	L	F	G	E	P	K	S	V	Q	A	T	A	S	L	L	A	S	.	.	.	.	G	V	D	A	Q	G	V	V	V	M	D	Y	G	D	F	S	V	T	L	Q	H	S	K	V	S	.	.
Query Conservation																																																			.	.	.	.																										.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.																										.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	Y	K	.	.	.	.	.	.	.	.	.	.	.	T	P	Q	A	I	Y	E	T	L	I	H	E	I	D	V	X	H	W	L	L	N	E	D	Y	K	T	V	K	V	Y	F	P	R	Q	S	S	L	V	T	T	L	R	D	P	Q	L	V	V	X	E	T	T	S	G	I	N	I	V	V	E	V	F	V	N	C	Q
Template Known Secondary structure		T			.	.	.	.	.	.	.	.	.	.	.							T	T													T												S			T	T			S	S			S								T	T										T	T		S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		163	.	.												.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
			233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure		.																																																																			.
Query SS confidence		.																																																																			.
Query Sequence		.	D	S	V	L	A	S	E	I	Q	G	E	A	G	S	L	V	I	E	K	L	S	E	C	Q	K	V	C	F	V	P	R	G	S	Q	M	Q	D	L	T	Q	P	Q	H	I	N	T	M	L	Y	E	A	E	L	F	A	T	L	V	D	E	H	L	V	D	H	P	.	G	L	A	V	S	R	I	T	A	K	L	L
Query Conservation		.																																																																			.
Alig confidence		.																																																																			.
Template Conservation
Template Sequence		Y	G	Y	D	I	H	C	D	V	T	G	E	K	G	X	A	E	L	P	T	V	A	S	A	A	V	R	K	A	A	K	Y	S	T	D	I	L	V	D	W	K	Q	R	F	I	D	A	Y	D	I	E	F	Q	D	F	F	D	R	L	N	A	G	L	P	P	A	G	P	T	S	W	D	G	Y	L	A	A	V	T	A
Template Known Secondary structure		S											S	S																T	T										G	G	G	T	T																	T	T					S	S
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		311	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	I	R	R	Q	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	C	V	K	S	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions