Job Description P42599 Confidence 95.79% Date Thu Jan 5 12:01:45 GMT 2012 Rank 439 Aligned Residues 120 % Identity 12% Template c3donA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase from staphylococcus2 epidermidis Resolution 2.10 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	A	V	I	G	T	N	W	I	T	R	Q	F	V	E	A	A	H	E	S	G	K	Y	K	L	T	A	V	Y	S	R	S	L	E	Q	A	Q	H	F	A	N	D	F	S	V	E	H	L	F	T	S	L	E	A	M	A	E	S	D	A	I	D	A	V	Y	I	A	S	P	N	S	L	H	F	S	Q	T	Q	L
Query Conservation
Alig confidence																													.																				.											.	.														.	.	.
Template Conservation																													.																				.											.	.														.	.	.
Template Sequence		Y	I	L	I	L	G	A	G	G	A	S	K	G	I	A	N	E	L	Y	K	I	V	R	P	T	L	T	.	V	A	N	R	T	M	S	R	F	N	N	W	S	L	N	I	N	K	I	.	N	L	S	H	A	E	S	H	L	D	.	.	E	F	D	I	I	I	N	T	T	P	D	S	V	.	.	.	I	S	L	N
Template Known Secondary structure									S												T	T			S				.				S		G	G	G	G	T	T			S						.								T	G	G	.	.	G		S										S	.	.	.	S			T
Template Predicted Secondary structure																													.																				.											.	.														.	.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.	.	.	.	.	.				.	.	190	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	S	H	K	I	N	V	I	C	E	K	P	L	A	S	N	L	A	E	V	D	A	A	I	A	C	A	R	E	N	Q	V	V	L	F	E	A	F	K	T	A	C	L	P	N	F	H	L	L	R
Query Conservation
Alig confidence												.	.	.								.
Template Conservation												.	.	.								.
Template Sequence		R	L	A	S	H	T	L	V	S	D	.	.	.	I	V	Y	N	P	Y	K	.	T	P	I	L	I	E	A	E	Q	R	G	N	P	I	Y	N	G	L	D	M	F	V	H	Q	G	A	E	S	F	K
Template Known Secondary structure		T			S	S						.	.	.	S			S	S	S	S	.										T	T						T
Template Predicted Secondary structure												.	.	.								.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.				.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions