Job Description P42599 Confidence 98.87% Date Thu Jan 5 12:01:45 GMT 2012 Rank 85 Aligned Residues 147 % Identity 14% Template c3c8mA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:homoserine dehydrogenase; PDBTitle: crystal structure of homoserine dehydrogenase from thermoplasma2 volcanium Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.								.	.	.	.	30	.	.	.	.	.												.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	R	F	A	V	I	G	T	N	W	I	T	R	Q	F	V	E	A	A	H	E	S	G	K	.	.	.	.	.	.	.	Y	K	L	T	A	V	Y	S	R	S	.	.	.	.	.	.	.	.	.	.	.	L	E	Q	A	Q	H	F	A	N	D	F	S	V	E	H	L	F	T	S	L	E	A	M	A	E	S	D	A
Query Conservation																										.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	N	L	S	I	F	G	L	G	N	V	G	L	N	L	L	R	I	I	R	S	F	N	E	E	N	R	L	G	L	K	F	N	V	V	F	V	A	D	S	L	H	S	Y	Y	N	E	R	I	D	I	G	K	V	I	S	Y	K	E	K	G	S	L	D	S	L	E	Y	E	S	I	S	A	S	E	A	L	A	R	D
Template Known Secondary structure										S																		S	S	S											S	S						T	T												T	T		G	G	G			S											S	S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		64	.	.	.	.	.	70	.	.	.	.	.	.					.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.																																										.
Query SS confidence															.	.	.	.																																										.
Query Sequence		I	D	A	V	Y	I	A	S	P	N	S	L	H	.	.	.	.	F	S	Q	T	Q	L	F	L	S	H	K	I	N	V	I	C	E	K	P	L	A	S	N	L	A	E	V	D	A	A	I	A	C	A	R	E	N	Q	V	V	L	.	F	E	A	F	K	T	A	C	L	P	N	F	H	L	L	R	Q	A	L	P	K
Query Conservation															.	.	.	.																																										.
Alig confidence															.	.	.	.																				.																						.																				.
Template Conservation																																						.																																										.
Template Sequence		F	D	I	V	V	D	A	T	P	A	S	A	D	G	K	K	E	L	A	F	Y	K	E	T	F	E	N	G	K	D	V	V	T	A	N	K	.	S	G	L	A	N	F	W	P	E	I	X	E	Y	A	R	S	N	N	R	R	I	R	Y	E	A	T	V	A	G	G	V	P	L	F	S	F	I	D	Y	S	V	.	L
Template Known Secondary structure			S						S				S	S	S													T	T									.																		T						G	G	G	S	S	T	T	S										S	.	T
Template Predicted Secondary structure																																						.																																										.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.
		139	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	K	L	R	K	V	F	F	N	Y	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	S	R	I	K	K	F	R	G	I	V	S
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions